Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Tnfrsf17O88472 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.26■■□□□ 1.31
Tnfrsf17O88472 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Tnfrsf17O88472 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Tnfrsf17O88472 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Tnfrsf17O88472 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.25■■□□□ 1.31
Tnfrsf17O88472 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tnfrsf17O88472 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Tnfrsf17O88472 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.23■■□□□ 1.31
Tnfrsf17O88472 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tnfrsf17O88472 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.21■■□□□ 1.31
Tnfrsf17O88472 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Tnfrsf17O88472 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Tnfrsf17O88472 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Tnfrsf17O88472 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.19■■□□□ 1.3
Tnfrsf17O88472 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Tnfrsf17O88472 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
Tnfrsf17O88472 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tnfrsf17O88472 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Tnfrsf17O88472 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.18■■□□□ 1.3
Tnfrsf17O88472 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tnfrsf17O88472 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.18■■□□□ 1.3
Tnfrsf17O88472 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Tnfrsf17O88472 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tnfrsf17O88472 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tnfrsf17O88472 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.16■■□□□ 1.3
Tnfrsf17O88472 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tnfrsf17O88472 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tnfrsf17O88472 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Tnfrsf17O88472 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Tnfrsf17O88472 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Tnfrsf17O88472 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tnfrsf17O88472 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tnfrsf17O88472 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tnfrsf17O88472 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Tnfrsf17O88472 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.12■■□□□ 1.29
Tnfrsf17O88472 Gm12366-201ENSMUST00000121722 873 ntBASIC23.12■■□□□ 1.29
Tnfrsf17O88472 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.12■■□□□ 1.29
Tnfrsf17O88472 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.12■■□□□ 1.29
Tnfrsf17O88472 Gm5786-201ENSMUST00000085368 882 ntBASIC23.12■■□□□ 1.29
Tnfrsf17O88472 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.1■■□□□ 1.29
Tnfrsf17O88472 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tnfrsf17O88472 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tnfrsf17O88472 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tnfrsf17O88472 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tnfrsf17O88472 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tnfrsf17O88472 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tnfrsf17O88472 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tnfrsf17O88472 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.08■■□□□ 1.29
Tnfrsf17O88472 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tnfrsf17O88472 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.07■■□□□ 1.28
Tnfrsf17O88472 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tnfrsf17O88472 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tnfrsf17O88472 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.06■■□□□ 1.28
Tnfrsf17O88472 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Tnfrsf17O88472 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.05■■□□□ 1.28
Tnfrsf17O88472 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tnfrsf17O88472 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Tnfrsf17O88472 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.03■■□□□ 1.28
Tnfrsf17O88472 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tnfrsf17O88472 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.02■■□□□ 1.28
Tnfrsf17O88472 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Tnfrsf17O88472 Scarna2-201ENSMUST00000157560 414 ntBASIC23■■□□□ 1.27
Tnfrsf17O88472 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tnfrsf17O88472 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Tnfrsf17O88472 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.98■■□□□ 1.27
Tnfrsf17O88472 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Tnfrsf17O88472 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tnfrsf17O88472 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Tnfrsf17O88472 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Tnfrsf17O88472 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Tnfrsf17O88472 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Tnfrsf17O88472 Gm11687-201ENSMUST00000118911 886 ntBASIC22.96■■□□□ 1.27
Tnfrsf17O88472 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.96■■□□□ 1.27
Tnfrsf17O88472 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Tnfrsf17O88472 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
Tnfrsf17O88472 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Tnfrsf17O88472 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Tnfrsf17O88472 Gm22567-201ENSMUST00000175542 342 ntBASIC22.93■■□□□ 1.26
Tnfrsf17O88472 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Tnfrsf17O88472 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Tnfrsf17O88472 Gm4799-201ENSMUST00000095396 657 ntBASIC22.93■■□□□ 1.26
Tnfrsf17O88472 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Tnfrsf17O88472 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.93■■□□□ 1.26
Tnfrsf17O88472 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Tnfrsf17O88472 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Tnfrsf17O88472 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.92■■□□□ 1.26
Tnfrsf17O88472 Gm9806-201ENSMUST00000051080 552 ntBASIC22.92■■□□□ 1.26
Tnfrsf17O88472 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Tnfrsf17O88472 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Tnfrsf17O88472 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Tnfrsf17O88472 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Tnfrsf17O88472 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Tnfrsf17O88472 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Tnfrsf17O88472 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Tnfrsf17O88472 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Tnfrsf17O88472 Gm7332-201ENSMUST00000118351 454 ntBASIC22.87■■□□□ 1.25
Tnfrsf17O88472 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Tnfrsf17O88472 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Tnfrsf17O88472 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms