Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atf6bO35451 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.87■□□□□ 0.93
Atf6bO35451 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.86■□□□□ 0.93
Atf6bO35451 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atf6bO35451 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atf6bO35451 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atf6bO35451 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Atf6bO35451 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atf6bO35451 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atf6bO35451 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atf6bO35451 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.83■□□□□ 0.93
Atf6bO35451 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Atf6bO35451 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.83■□□□□ 0.92
Atf6bO35451 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atf6bO35451 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atf6bO35451 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Atf6bO35451 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atf6bO35451 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.81■□□□□ 0.92
Atf6bO35451 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.81■□□□□ 0.92
Atf6bO35451 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Atf6bO35451 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.81■□□□□ 0.92
Atf6bO35451 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.8■□□□□ 0.92
Atf6bO35451 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atf6bO35451 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atf6bO35451 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atf6bO35451 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Atf6bO35451 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atf6bO35451 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atf6bO35451 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Atf6bO35451 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.75■□□□□ 0.91
Atf6bO35451 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.74■□□□□ 0.91
Atf6bO35451 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atf6bO35451 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atf6bO35451 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Atf6bO35451 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atf6bO35451 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atf6bO35451 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atf6bO35451 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf6bO35451 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.71■□□□□ 0.91
Atf6bO35451 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf6bO35451 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Atf6bO35451 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.71■□□□□ 0.91
Atf6bO35451 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Atf6bO35451 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.7■□□□□ 0.9
Atf6bO35451 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atf6bO35451 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atf6bO35451 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf6bO35451 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf6bO35451 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.69■□□□□ 0.9
Atf6bO35451 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf6bO35451 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.69■□□□□ 0.9
Atf6bO35451 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atf6bO35451 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Atf6bO35451 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atf6bO35451 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Atf6bO35451 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atf6bO35451 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Atf6bO35451 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atf6bO35451 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atf6bO35451 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atf6bO35451 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atf6bO35451 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atf6bO35451 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atf6bO35451 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atf6bO35451 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atf6bO35451 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Atf6bO35451 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atf6bO35451 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atf6bO35451 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Atf6bO35451 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Atf6bO35451 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atf6bO35451 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Atf6bO35451 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
Atf6bO35451 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atf6bO35451 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atf6bO35451 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf6bO35451 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf6bO35451 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf6bO35451 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.6■□□□□ 0.89
Atf6bO35451 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Atf6bO35451 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf6bO35451 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.6■□□□□ 0.89
Atf6bO35451 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf6bO35451 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf6bO35451 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf6bO35451 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atf6bO35451 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Atf6bO35451 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Atf6bO35451 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Atf6bO35451 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atf6bO35451 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atf6bO35451 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Atf6bO35451 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atf6bO35451 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atf6bO35451 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Atf6bO35451 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atf6bO35451 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Atf6bO35451 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf6bO35451 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf6bO35451 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms