Protein–RNA interactions for Protein: E9Q7U0

Kcnmb3, Potassium large conductance calcium-activated channel, subfamily M, beta member 3, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnmb3E9Q7U0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Kcnmb3E9Q7U0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
Kcnmb3E9Q7U0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kcnmb3E9Q7U0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kcnmb3E9Q7U0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.65■■□□□ 1.22
Kcnmb3E9Q7U0 Zfp131-205ENSMUST00000223812 663 ntBASIC22.65■■□□□ 1.22
Kcnmb3E9Q7U0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.64■■□□□ 1.22
Kcnmb3E9Q7U0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Kcnmb3E9Q7U0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Kcnmb3E9Q7U0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Kcnmb3E9Q7U0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Kcnmb3E9Q7U0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kcnmb3E9Q7U0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Kcnmb3E9Q7U0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kcnmb3E9Q7U0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kcnmb3E9Q7U0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Kcnmb3E9Q7U0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kcnmb3E9Q7U0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Kcnmb3E9Q7U0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kcnmb3E9Q7U0 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.6■■□□□ 1.21
Kcnmb3E9Q7U0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Kcnmb3E9Q7U0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Kcnmb3E9Q7U0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnmb3E9Q7U0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnmb3E9Q7U0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.57■■□□□ 1.2
Kcnmb3E9Q7U0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnmb3E9Q7U0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Kcnmb3E9Q7U0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Kcnmb3E9Q7U0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.56■■□□□ 1.2
Kcnmb3E9Q7U0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.55■■□□□ 1.2
Kcnmb3E9Q7U0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Kcnmb3E9Q7U0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Kcnmb3E9Q7U0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.53■■□□□ 1.2
Kcnmb3E9Q7U0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Kcnmb3E9Q7U0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Kcnmb3E9Q7U0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Kcnmb3E9Q7U0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kcnmb3E9Q7U0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kcnmb3E9Q7U0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.5■■□□□ 1.19
Kcnmb3E9Q7U0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kcnmb3E9Q7U0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Kcnmb3E9Q7U0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kcnmb3E9Q7U0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Kcnmb3E9Q7U0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.47■■□□□ 1.19
Kcnmb3E9Q7U0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kcnmb3E9Q7U0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Kcnmb3E9Q7U0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Kcnmb3E9Q7U0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Kcnmb3E9Q7U0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Kcnmb3E9Q7U0 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.46■■□□□ 1.19
Kcnmb3E9Q7U0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Kcnmb3E9Q7U0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.46■■□□□ 1.19
Kcnmb3E9Q7U0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Kcnmb3E9Q7U0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Kcnmb3E9Q7U0 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.45■■□□□ 1.18
Kcnmb3E9Q7U0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Kcnmb3E9Q7U0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Kcnmb3E9Q7U0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Kcnmb3E9Q7U0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Kcnmb3E9Q7U0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Kcnmb3E9Q7U0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Kcnmb3E9Q7U0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Kcnmb3E9Q7U0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Kcnmb3E9Q7U0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Kcnmb3E9Q7U0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Kcnmb3E9Q7U0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.42■■□□□ 1.18
Kcnmb3E9Q7U0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Kcnmb3E9Q7U0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Kcnmb3E9Q7U0 Gm9397-201ENSMUST00000200125 605 ntBASIC22.4■■□□□ 1.18
Kcnmb3E9Q7U0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Kcnmb3E9Q7U0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.39■■□□□ 1.17
Kcnmb3E9Q7U0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Kcnmb3E9Q7U0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
Kcnmb3E9Q7U0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.38■■□□□ 1.17
Kcnmb3E9Q7U0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Kcnmb3E9Q7U0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kcnmb3E9Q7U0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Kcnmb3E9Q7U0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Kcnmb3E9Q7U0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.36■■□□□ 1.17
Kcnmb3E9Q7U0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kcnmb3E9Q7U0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kcnmb3E9Q7U0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kcnmb3E9Q7U0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.34■■□□□ 1.17
Kcnmb3E9Q7U0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.34■■□□□ 1.17
Kcnmb3E9Q7U0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Kcnmb3E9Q7U0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Kcnmb3E9Q7U0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Kcnmb3E9Q7U0 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.33■■□□□ 1.17
Kcnmb3E9Q7U0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.33■■□□□ 1.16
Kcnmb3E9Q7U0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kcnmb3E9Q7U0 Gm45855-201ENSMUST00000212546 880 ntBASIC22.31■■□□□ 1.16
Kcnmb3E9Q7U0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Kcnmb3E9Q7U0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Kcnmb3E9Q7U0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Kcnmb3E9Q7U0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Kcnmb3E9Q7U0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Kcnmb3E9Q7U0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Kcnmb3E9Q7U0 Gm24970-201ENSMUST00000175582 82 ntBASIC22.29■■□□□ 1.16
Kcnmb3E9Q7U0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kcnmb3E9Q7U0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms