Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ccdc85cE9Q6B2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Ccdc85cE9Q6B2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC31.4■■■□□ 2.62
Ccdc85cE9Q6B2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC31.39■■■□□ 2.62
Ccdc85cE9Q6B2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.39■■■□□ 2.62
Ccdc85cE9Q6B2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC31.39■■■□□ 2.62
Ccdc85cE9Q6B2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
Ccdc85cE9Q6B2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ccdc85cE9Q6B2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Ccdc85cE9Q6B2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.37■■■□□ 2.61
Ccdc85cE9Q6B2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC31.36■■■□□ 2.61
Ccdc85cE9Q6B2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC31.35■■■□□ 2.61
Ccdc85cE9Q6B2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC31.34■■■□□ 2.61
Ccdc85cE9Q6B2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Ccdc85cE9Q6B2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccdc85cE9Q6B2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccdc85cE9Q6B2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
Ccdc85cE9Q6B2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
Ccdc85cE9Q6B2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Ccdc85cE9Q6B2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ccdc85cE9Q6B2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
Ccdc85cE9Q6B2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ccdc85cE9Q6B2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC31.3■■■□□ 2.6
Ccdc85cE9Q6B2 Gm12366-201ENSMUST00000121722 873 ntBASIC31.3■■■□□ 2.6
Ccdc85cE9Q6B2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC31.3■■■□□ 2.6
Ccdc85cE9Q6B2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ccdc85cE9Q6B2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC31.3■■■□□ 2.6
Ccdc85cE9Q6B2 Gm5786-201ENSMUST00000085368 882 ntBASIC31.3■■■□□ 2.6
Ccdc85cE9Q6B2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC31.29■■■□□ 2.6
Ccdc85cE9Q6B2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ccdc85cE9Q6B2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC31.27■■■□□ 2.6
Ccdc85cE9Q6B2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Ccdc85cE9Q6B2 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.27■■■□□ 2.6
Ccdc85cE9Q6B2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Ccdc85cE9Q6B2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Ccdc85cE9Q6B2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ccdc85cE9Q6B2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ccdc85cE9Q6B2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Ccdc85cE9Q6B2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Ccdc85cE9Q6B2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ccdc85cE9Q6B2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ccdc85cE9Q6B2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Ccdc85cE9Q6B2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC31.21■■■□□ 2.59
Ccdc85cE9Q6B2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ccdc85cE9Q6B2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Ccdc85cE9Q6B2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Ccdc85cE9Q6B2 Scarna2-201ENSMUST00000157560 414 ntBASIC31.18■■■□□ 2.58
Ccdc85cE9Q6B2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC31.18■■■□□ 2.58
Ccdc85cE9Q6B2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ccdc85cE9Q6B2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ccdc85cE9Q6B2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ccdc85cE9Q6B2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ccdc85cE9Q6B2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
Ccdc85cE9Q6B2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ccdc85cE9Q6B2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc85cE9Q6B2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc85cE9Q6B2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ccdc85cE9Q6B2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC31.12■■■□□ 2.57
Ccdc85cE9Q6B2 Gm22567-201ENSMUST00000175542 342 ntBASIC31.12■■■□□ 2.57
Ccdc85cE9Q6B2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Ccdc85cE9Q6B2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Ccdc85cE9Q6B2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Ccdc85cE9Q6B2 Gm11687-201ENSMUST00000118911 886 ntBASIC31.1■■■□□ 2.57
Ccdc85cE9Q6B2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ccdc85cE9Q6B2 Gm4799-201ENSMUST00000095396 657 ntBASIC31.08■■■□□ 2.57
Ccdc85cE9Q6B2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.06■■■□□ 2.56
Ccdc85cE9Q6B2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC31.06■■■□□ 2.56
Ccdc85cE9Q6B2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ccdc85cE9Q6B2 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.05■■■□□ 2.56
Ccdc85cE9Q6B2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Ccdc85cE9Q6B2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC31.04■■■□□ 2.56
Ccdc85cE9Q6B2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ccdc85cE9Q6B2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc85cE9Q6B2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC31.03■■■□□ 2.56
Ccdc85cE9Q6B2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
Ccdc85cE9Q6B2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc85cE9Q6B2 Gm9806-201ENSMUST00000051080 552 ntBASIC31.02■■■□□ 2.56
Ccdc85cE9Q6B2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc85cE9Q6B2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc85cE9Q6B2 Gm16437-201ENSMUST00000025669 507 ntBASIC31■■■□□ 2.55
Ccdc85cE9Q6B2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC31■■■□□ 2.55
Ccdc85cE9Q6B2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ccdc85cE9Q6B2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc85cE9Q6B2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc85cE9Q6B2 Gm7332-201ENSMUST00000118351 454 ntBASIC30.98■■■□□ 2.55
Ccdc85cE9Q6B2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
Ccdc85cE9Q6B2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ccdc85cE9Q6B2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc85cE9Q6B2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc85cE9Q6B2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Ccdc85cE9Q6B2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Ccdc85cE9Q6B2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Ccdc85cE9Q6B2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
Ccdc85cE9Q6B2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Ccdc85cE9Q6B2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
Ccdc85cE9Q6B2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Ccdc85cE9Q6B2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC30.91■■■□□ 2.54
Ccdc85cE9Q6B2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ccdc85cE9Q6B2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ccdc85cE9Q6B2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.9■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms