Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Hfm1D3Z4R1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC35.79■■■■□ 3.32
Hfm1D3Z4R1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
Hfm1D3Z4R1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC35.77■■■■□ 3.32
Hfm1D3Z4R1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC35.77■■■■□ 3.32
Hfm1D3Z4R1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
Hfm1D3Z4R1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC35.76■■■■□ 3.31
Hfm1D3Z4R1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
Hfm1D3Z4R1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
Hfm1D3Z4R1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC35.73■■■■□ 3.31
Hfm1D3Z4R1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
Hfm1D3Z4R1 Gm2415-204ENSMUST00000190235 2004 ntBASIC35.72■■■■□ 3.31
Hfm1D3Z4R1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC35.72■■■■□ 3.31
Hfm1D3Z4R1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC35.7■■■■□ 3.3
Hfm1D3Z4R1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC35.69■■■■□ 3.3
Hfm1D3Z4R1 Cap2-205ENSMUST00000225824 1634 ntBASIC35.68■■■■□ 3.3
Hfm1D3Z4R1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
Hfm1D3Z4R1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC35.67■■■■□ 3.3
Hfm1D3Z4R1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
Hfm1D3Z4R1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
Hfm1D3Z4R1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
Hfm1D3Z4R1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC35.61■■■■□ 3.29
Hfm1D3Z4R1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC35.57■■■■□ 3.28
Hfm1D3Z4R1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC35.57■■■■□ 3.28
Hfm1D3Z4R1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC35.56■■■■□ 3.28
Hfm1D3Z4R1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
Hfm1D3Z4R1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
Hfm1D3Z4R1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC35.54■■■■□ 3.28
Hfm1D3Z4R1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
Hfm1D3Z4R1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Hfm1D3Z4R1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
Hfm1D3Z4R1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
Hfm1D3Z4R1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
Hfm1D3Z4R1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
Hfm1D3Z4R1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
Hfm1D3Z4R1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
Hfm1D3Z4R1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC35.47■■■■□ 3.27
Hfm1D3Z4R1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
Hfm1D3Z4R1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC35.43■■■■□ 3.26
Hfm1D3Z4R1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
Hfm1D3Z4R1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
Hfm1D3Z4R1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
Hfm1D3Z4R1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC35.41■■■■□ 3.26
Hfm1D3Z4R1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
Hfm1D3Z4R1 Gm6658-202ENSMUST00000209493 1885 ntBASIC35.41■■■■□ 3.26
Hfm1D3Z4R1 Gm6345-201ENSMUST00000180378 1691 ntBASIC35.41■■■■□ 3.26
Hfm1D3Z4R1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Hfm1D3Z4R1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC35.4■■■■□ 3.26
Hfm1D3Z4R1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC35.39■■■■□ 3.26
Hfm1D3Z4R1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
Hfm1D3Z4R1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC35.37■■■■□ 3.25
Hfm1D3Z4R1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC35.37■■■■□ 3.25
Hfm1D3Z4R1 Gm6311-201ENSMUST00000073790 878 ntBASIC35.37■■■■□ 3.25
Hfm1D3Z4R1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
Hfm1D3Z4R1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC35.36■■■■□ 3.25
Hfm1D3Z4R1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
Hfm1D3Z4R1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Hfm1D3Z4R1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
Hfm1D3Z4R1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Hfm1D3Z4R1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC35.35■■■■□ 3.25
Hfm1D3Z4R1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
Hfm1D3Z4R1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Hfm1D3Z4R1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC35.34■■■■□ 3.25
Hfm1D3Z4R1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Hfm1D3Z4R1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC35.32■■■■□ 3.25
Hfm1D3Z4R1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
Hfm1D3Z4R1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC35.31■■■■□ 3.24
Hfm1D3Z4R1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC35.31■■■■□ 3.24
Hfm1D3Z4R1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC35.29■■■■□ 3.24
Hfm1D3Z4R1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
Hfm1D3Z4R1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC35.28■■■■□ 3.24
Hfm1D3Z4R1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC35.28■■■■□ 3.24
Hfm1D3Z4R1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC35.27■■■■□ 3.24
Hfm1D3Z4R1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
Hfm1D3Z4R1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC35.25■■■■□ 3.23
Hfm1D3Z4R1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
Hfm1D3Z4R1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
Hfm1D3Z4R1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Hfm1D3Z4R1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC35.23■■■■□ 3.23
Hfm1D3Z4R1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Hfm1D3Z4R1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC35.22■■■■□ 3.23
Hfm1D3Z4R1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
Hfm1D3Z4R1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
Hfm1D3Z4R1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
Hfm1D3Z4R1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC35.17■■■■□ 3.22
Hfm1D3Z4R1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Hfm1D3Z4R1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC35.17■■■■□ 3.22
Hfm1D3Z4R1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC35.17■■■■□ 3.22
Hfm1D3Z4R1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC35.16■■■■□ 3.22
Hfm1D3Z4R1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC35.16■■■■□ 3.22
Hfm1D3Z4R1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC35.15■■■■□ 3.22
Hfm1D3Z4R1 Particl-201ENSMUST00000205370 1560 ntBASIC35.14■■■■□ 3.22
Hfm1D3Z4R1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
Hfm1D3Z4R1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
Hfm1D3Z4R1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC35.14■■■■□ 3.22
Hfm1D3Z4R1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
Hfm1D3Z4R1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
Hfm1D3Z4R1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
Hfm1D3Z4R1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC35.11■■■■□ 3.21
Hfm1D3Z4R1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC35.11■■■■□ 3.21
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms