Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Col6a5A6H584 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Col6a5A6H584 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col6a5A6H584 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Col6a5A6H584 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col6a5A6H584 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Col6a5A6H584 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Col6a5A6H584 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a5A6H584 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col6a5A6H584 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col6a5A6H584 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.3■□□□□ 0.68
Col6a5A6H584 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.3■□□□□ 0.68
Col6a5A6H584 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.3■□□□□ 0.68
Col6a5A6H584 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col6a5A6H584 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.28■□□□□ 0.68
Col6a5A6H584 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col6a5A6H584 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col6a5A6H584 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col6a5A6H584 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col6a5A6H584 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Col6a5A6H584 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.25■□□□□ 0.67
Col6a5A6H584 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Col6a5A6H584 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col6a5A6H584 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col6a5A6H584 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.24■□□□□ 0.67
Col6a5A6H584 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.23■□□□□ 0.67
Col6a5A6H584 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col6a5A6H584 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.23■□□□□ 0.67
Col6a5A6H584 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col6a5A6H584 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col6a5A6H584 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.22■□□□□ 0.67
Col6a5A6H584 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col6a5A6H584 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col6a5A6H584 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col6a5A6H584 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col6a5A6H584 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col6a5A6H584 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col6a5A6H584 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col6a5A6H584 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col6a5A6H584 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.21■□□□□ 0.66
Col6a5A6H584 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.21■□□□□ 0.66
Col6a5A6H584 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.2■□□□□ 0.66
Col6a5A6H584 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Col6a5A6H584 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col6a5A6H584 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col6a5A6H584 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col6a5A6H584 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col6a5A6H584 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Col6a5A6H584 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col6a5A6H584 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Col6a5A6H584 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col6a5A6H584 Gm4799-201ENSMUST00000095396 657 ntBASIC19.17■□□□□ 0.66
Col6a5A6H584 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.16■□□□□ 0.66
Col6a5A6H584 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.16■□□□□ 0.66
Col6a5A6H584 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col6a5A6H584 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col6a5A6H584 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.15■□□□□ 0.66
Col6a5A6H584 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.15■□□□□ 0.66
Col6a5A6H584 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col6a5A6H584 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
Col6a5A6H584 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col6a5A6H584 Gm7332-201ENSMUST00000118351 454 ntBASIC19.12■□□□□ 0.65
Col6a5A6H584 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.12■□□□□ 0.65
Col6a5A6H584 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.11■□□□□ 0.65
Col6a5A6H584 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.11■□□□□ 0.65
Col6a5A6H584 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col6a5A6H584 Scarna2-201ENSMUST00000157560 414 ntBASIC19.11■□□□□ 0.65
Col6a5A6H584 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.1■□□□□ 0.65
Col6a5A6H584 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col6a5A6H584 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col6a5A6H584 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col6a5A6H584 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col6a5A6H584 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.08■□□□□ 0.65
Col6a5A6H584 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.08■□□□□ 0.65
Col6a5A6H584 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col6a5A6H584 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col6a5A6H584 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Col6a5A6H584 Gm11687-201ENSMUST00000118911 886 ntBASIC19.07■□□□□ 0.64
Col6a5A6H584 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a5A6H584 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a5A6H584 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a5A6H584 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.06■□□□□ 0.64
Col6a5A6H584 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.05■□□□□ 0.64
Col6a5A6H584 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a5A6H584 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a5A6H584 Gm15546-201ENSMUST00000122095 826 ntBASIC19.04■□□□□ 0.64
Col6a5A6H584 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.04■□□□□ 0.64
Col6a5A6H584 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col6a5A6H584 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.04■□□□□ 0.64
Col6a5A6H584 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a5A6H584 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a5A6H584 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col6a5A6H584 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Col6a5A6H584 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col6a5A6H584 Gm9806-201ENSMUST00000051080 552 ntBASIC19.02■□□□□ 0.63
Col6a5A6H584 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a5A6H584 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a5A6H584 Gm16437-201ENSMUST00000025669 507 ntBASIC19.01■□□□□ 0.63
Col6a5A6H584 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a5A6H584 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms