Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trav19A0A0B4J1K4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav19A0A0B4J1K4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav19A0A0B4J1K4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav19A0A0B4J1K4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trav19A0A0B4J1K4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav19A0A0B4J1K4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav19A0A0B4J1K4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav19A0A0B4J1K4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav19A0A0B4J1K4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trav19A0A0B4J1K4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav19A0A0B4J1K4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav19A0A0B4J1K4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav19A0A0B4J1K4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Trav19A0A0B4J1K4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trav19A0A0B4J1K4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav19A0A0B4J1K4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav19A0A0B4J1K4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav19A0A0B4J1K4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Trav19A0A0B4J1K4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav19A0A0B4J1K4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Trav19A0A0B4J1K4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav19A0A0B4J1K4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trav19A0A0B4J1K4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.96■□□□□ 0.47
Trav19A0A0B4J1K4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trav19A0A0B4J1K4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trav19A0A0B4J1K4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav19A0A0B4J1K4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trav19A0A0B4J1K4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav19A0A0B4J1K4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav19A0A0B4J1K4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav19A0A0B4J1K4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav19A0A0B4J1K4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trav19A0A0B4J1K4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav19A0A0B4J1K4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav19A0A0B4J1K4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav19A0A0B4J1K4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav19A0A0B4J1K4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav19A0A0B4J1K4 Gm26115-201ENSMUST00000175605 87 ntBASIC17.93■□□□□ 0.46
Trav19A0A0B4J1K4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Trav19A0A0B4J1K4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav19A0A0B4J1K4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav19A0A0B4J1K4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav19A0A0B4J1K4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav19A0A0B4J1K4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav19A0A0B4J1K4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav19A0A0B4J1K4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav19A0A0B4J1K4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav19A0A0B4J1K4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.9■□□□□ 0.46
Trav19A0A0B4J1K4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.9■□□□□ 0.46
Trav19A0A0B4J1K4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav19A0A0B4J1K4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.46
Trav19A0A0B4J1K4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav19A0A0B4J1K4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trav19A0A0B4J1K4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav19A0A0B4J1K4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav19A0A0B4J1K4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav19A0A0B4J1K4 Gm8109-201ENSMUST00000194076 746 ntBASIC17.89■□□□□ 0.45
Trav19A0A0B4J1K4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav19A0A0B4J1K4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trav19A0A0B4J1K4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav19A0A0B4J1K4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav19A0A0B4J1K4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav19A0A0B4J1K4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.87■□□□□ 0.45
Trav19A0A0B4J1K4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav19A0A0B4J1K4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav19A0A0B4J1K4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav19A0A0B4J1K4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav19A0A0B4J1K4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trav19A0A0B4J1K4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav19A0A0B4J1K4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav19A0A0B4J1K4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav19A0A0B4J1K4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav19A0A0B4J1K4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav19A0A0B4J1K4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav19A0A0B4J1K4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trav19A0A0B4J1K4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trav19A0A0B4J1K4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
Trav19A0A0B4J1K4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav19A0A0B4J1K4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav19A0A0B4J1K4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav19A0A0B4J1K4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav19A0A0B4J1K4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav19A0A0B4J1K4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.82■□□□□ 0.44
Trav19A0A0B4J1K4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav19A0A0B4J1K4 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.82■□□□□ 0.44
Trav19A0A0B4J1K4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav19A0A0B4J1K4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav19A0A0B4J1K4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav19A0A0B4J1K4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav19A0A0B4J1K4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav19A0A0B4J1K4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trav19A0A0B4J1K4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav19A0A0B4J1K4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav19A0A0B4J1K4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav19A0A0B4J1K4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav19A0A0B4J1K4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav19A0A0B4J1K4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav19A0A0B4J1K4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav19A0A0B4J1K4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms