Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sirpb1bA0A0A6YXN8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.23■□□□□ 0.99
Sirpb1bA0A0A6YXN8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sirpb1bA0A0A6YXN8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Sirpb1bA0A0A6YXN8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sirpb1bA0A0A6YXN8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.22■□□□□ 0.99
Sirpb1bA0A0A6YXN8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.22■□□□□ 0.99
Sirpb1bA0A0A6YXN8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.18■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.17■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sirpb1bA0A0A6YXN8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sirpb1bA0A0A6YXN8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sirpb1bA0A0A6YXN8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sirpb1bA0A0A6YXN8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sirpb1bA0A0A6YXN8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sirpb1bA0A0A6YXN8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sirpb1bA0A0A6YXN8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.12■□□□□ 0.97
Sirpb1bA0A0A6YXN8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.12■□□□□ 0.97
Sirpb1bA0A0A6YXN8 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.12■□□□□ 0.97
Sirpb1bA0A0A6YXN8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sirpb1bA0A0A6YXN8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sirpb1bA0A0A6YXN8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sirpb1bA0A0A6YXN8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sirpb1bA0A0A6YXN8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sirpb1bA0A0A6YXN8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.1■□□□□ 0.97
Sirpb1bA0A0A6YXN8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sirpb1bA0A0A6YXN8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sirpb1bA0A0A6YXN8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Sirpb1bA0A0A6YXN8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Sirpb1bA0A0A6YXN8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Sirpb1bA0A0A6YXN8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sirpb1bA0A0A6YXN8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sirpb1bA0A0A6YXN8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sirpb1bA0A0A6YXN8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sirpb1bA0A0A6YXN8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Sirpb1bA0A0A6YXN8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sirpb1bA0A0A6YXN8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Sirpb1bA0A0A6YXN8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sirpb1bA0A0A6YXN8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Sirpb1bA0A0A6YXN8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sirpb1bA0A0A6YXN8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.04■□□□□ 0.96
Sirpb1bA0A0A6YXN8 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.03■□□□□ 0.96
Sirpb1bA0A0A6YXN8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sirpb1bA0A0A6YXN8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sirpb1bA0A0A6YXN8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sirpb1bA0A0A6YXN8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sirpb1bA0A0A6YXN8 Gm6821-201ENSMUST00000107540 542 ntBASIC21.01■□□□□ 0.95
Sirpb1bA0A0A6YXN8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.01■□□□□ 0.95
Sirpb1bA0A0A6YXN8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sirpb1bA0A0A6YXN8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sirpb1bA0A0A6YXN8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Sirpb1bA0A0A6YXN8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sirpb1bA0A0A6YXN8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21■□□□□ 0.95
Sirpb1bA0A0A6YXN8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sirpb1bA0A0A6YXN8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sirpb1bA0A0A6YXN8 Gm8503-201ENSMUST00000118131 455 ntBASIC20.98■□□□□ 0.95
Sirpb1bA0A0A6YXN8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sirpb1bA0A0A6YXN8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sirpb1bA0A0A6YXN8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sirpb1bA0A0A6YXN8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sirpb1bA0A0A6YXN8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Sirpb1bA0A0A6YXN8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sirpb1bA0A0A6YXN8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Sirpb1bA0A0A6YXN8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sirpb1bA0A0A6YXN8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sirpb1bA0A0A6YXN8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sirpb1bA0A0A6YXN8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sirpb1bA0A0A6YXN8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sirpb1bA0A0A6YXN8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
Sirpb1bA0A0A6YXN8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sirpb1bA0A0A6YXN8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.92■□□□□ 0.94
Sirpb1bA0A0A6YXN8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Sirpb1bA0A0A6YXN8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sirpb1bA0A0A6YXN8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sirpb1bA0A0A6YXN8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.9■□□□□ 0.94
Sirpb1bA0A0A6YXN8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sirpb1bA0A0A6YXN8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
Sirpb1bA0A0A6YXN8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.9■□□□□ 0.94
Sirpb1bA0A0A6YXN8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Sirpb1bA0A0A6YXN8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms