Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-9A0A0A6YW37 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-9A0A0A6YW37 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-9A0A0A6YW37 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-9A0A0A6YW37 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-9A0A0A6YW37 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.2■□□□□ 0.5
Ighv1-9A0A0A6YW37 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-9A0A0A6YW37 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-9A0A0A6YW37 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-9A0A0A6YW37 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-9A0A0A6YW37 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-9A0A0A6YW37 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-9A0A0A6YW37 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-9A0A0A6YW37 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-9A0A0A6YW37 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.18■□□□□ 0.5
Ighv1-9A0A0A6YW37 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-9A0A0A6YW37 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-9A0A0A6YW37 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ighv1-9A0A0A6YW37 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-9A0A0A6YW37 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.16■□□□□ 0.5
Ighv1-9A0A0A6YW37 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-9A0A0A6YW37 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-9A0A0A6YW37 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-9A0A0A6YW37 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-9A0A0A6YW37 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-9A0A0A6YW37 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-9A0A0A6YW37 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-9A0A0A6YW37 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.13■□□□□ 0.49
Ighv1-9A0A0A6YW37 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-9A0A0A6YW37 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-9A0A0A6YW37 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-9A0A0A6YW37 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-9A0A0A6YW37 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-9A0A0A6YW37 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Ighv1-9A0A0A6YW37 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-9A0A0A6YW37 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-9A0A0A6YW37 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-9A0A0A6YW37 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-9A0A0A6YW37 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-9A0A0A6YW37 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-9A0A0A6YW37 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-9A0A0A6YW37 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-9A0A0A6YW37 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ighv1-9A0A0A6YW37 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-9A0A0A6YW37 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-9A0A0A6YW37 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.08■□□□□ 0.48
Ighv1-9A0A0A6YW37 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-9A0A0A6YW37 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-9A0A0A6YW37 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-9A0A0A6YW37 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.06■□□□□ 0.48
Ighv1-9A0A0A6YW37 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ighv1-9A0A0A6YW37 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.05■□□□□ 0.48
Ighv1-9A0A0A6YW37 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-9A0A0A6YW37 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-9A0A0A6YW37 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-9A0A0A6YW37 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-9A0A0A6YW37 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-9A0A0A6YW37 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ighv1-9A0A0A6YW37 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-9A0A0A6YW37 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-9A0A0A6YW37 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-9A0A0A6YW37 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-9A0A0A6YW37 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-9A0A0A6YW37 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-9A0A0A6YW37 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-9A0A0A6YW37 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-9A0A0A6YW37 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-9A0A0A6YW37 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-9A0A0A6YW37 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.98■□□□□ 0.47
Ighv1-9A0A0A6YW37 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-9A0A0A6YW37 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ighv1-9A0A0A6YW37 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-9A0A0A6YW37 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-9A0A0A6YW37 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.98■□□□□ 0.47
Ighv1-9A0A0A6YW37 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-9A0A0A6YW37 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ighv1-9A0A0A6YW37 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-9A0A0A6YW37 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.96■□□□□ 0.47
Ighv1-9A0A0A6YW37 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-9A0A0A6YW37 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ighv1-9A0A0A6YW37 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ighv1-9A0A0A6YW37 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-9A0A0A6YW37 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ighv1-9A0A0A6YW37 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-9A0A0A6YW37 Zfp131-205ENSMUST00000223812 663 ntBASIC17.94■□□□□ 0.46
Ighv1-9A0A0A6YW37 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-9A0A0A6YW37 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-9A0A0A6YW37 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-9A0A0A6YW37 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.93■□□□□ 0.46
Ighv1-9A0A0A6YW37 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-9A0A0A6YW37 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-9A0A0A6YW37 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-9A0A0A6YW37 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ighv1-9A0A0A6YW37 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.92■□□□□ 0.46
Ighv1-9A0A0A6YW37 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-9A0A0A6YW37 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.92■□□□□ 0.46
Ighv1-9A0A0A6YW37 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-9A0A0A6YW37 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-9A0A0A6YW37 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.91■□□□□ 0.46
Ighv1-9A0A0A6YW37 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms