Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trav3-4A0A075B654 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav3-4A0A075B654 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav3-4A0A075B654 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav3-4A0A075B654 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav3-4A0A075B654 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav3-4A0A075B654 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav3-4A0A075B654 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav3-4A0A075B654 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav3-4A0A075B654 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav3-4A0A075B654 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav3-4A0A075B654 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3-4A0A075B654 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3-4A0A075B654 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3-4A0A075B654 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3-4A0A075B654 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3-4A0A075B654 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav3-4A0A075B654 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav3-4A0A075B654 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav3-4A0A075B654 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC16.16■□□□□ 0.18
Trav3-4A0A075B654 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav3-4A0A075B654 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav3-4A0A075B654 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav3-4A0A075B654 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav3-4A0A075B654 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav3-4A0A075B654 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav3-4A0A075B654 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav3-4A0A075B654 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav3-4A0A075B654 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav3-4A0A075B654 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav3-4A0A075B654 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav3-4A0A075B654 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav3-4A0A075B654 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav3-4A0A075B654 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav3-4A0A075B654 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav3-4A0A075B654 Mipep-204ENSMUST00000225043 1548 ntBASIC16.11■□□□□ 0.17
Trav3-4A0A075B654 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav3-4A0A075B654 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav3-4A0A075B654 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Trav3-4A0A075B654 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav3-4A0A075B654 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav3-4A0A075B654 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav3-4A0A075B654 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.1■□□□□ 0.17
Trav3-4A0A075B654 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav3-4A0A075B654 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav3-4A0A075B654 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav3-4A0A075B654 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav3-4A0A075B654 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav3-4A0A075B654 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC16.09■□□□□ 0.17
Trav3-4A0A075B654 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav3-4A0A075B654 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav3-4A0A075B654 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav3-4A0A075B654 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav3-4A0A075B654 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav3-4A0A075B654 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav3-4A0A075B654 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav3-4A0A075B654 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav3-4A0A075B654 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav3-4A0A075B654 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav3-4A0A075B654 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav3-4A0A075B654 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav3-4A0A075B654 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav3-4A0A075B654 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav3-4A0A075B654 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav3-4A0A075B654 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav3-4A0A075B654 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav3-4A0A075B654 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav3-4A0A075B654 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav3-4A0A075B654 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Trav3-4A0A075B654 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav3-4A0A075B654 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav3-4A0A075B654 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav3-4A0A075B654 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav3-4A0A075B654 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav3-4A0A075B654 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav3-4A0A075B654 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trav3-4A0A075B654 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav3-4A0A075B654 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav3-4A0A075B654 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav3-4A0A075B654 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav3-4A0A075B654 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav3-4A0A075B654 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav3-4A0A075B654 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav3-4A0A075B654 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav3-4A0A075B654 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trav3-4A0A075B654 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav3-4A0A075B654 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav3-4A0A075B654 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav3-4A0A075B654 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav3-4A0A075B654 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav3-4A0A075B654 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav3-4A0A075B654 Gm17641-201ENSMUST00000166328 2350 ntBASIC16■□□□□ 0.15
Trav3-4A0A075B654 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav3-4A0A075B654 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC16■□□□□ 0.15
Trav3-4A0A075B654 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav3-4A0A075B654 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Trav3-4A0A075B654 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav3-4A0A075B654 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC15.99■□□□□ 0.15
Trav3-4A0A075B654 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav3-4A0A075B654 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms