Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Zfp429-203ENSMUST00000224684 524 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 AC102291.1-201ENSMUST00000227164 529 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 AC107369.1-201ENSMUST00000227373 860 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 AC123665.3-201ENSMUST00000228735 1216 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 AC124408.1-201ENSMUST00000228938 707 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sdc1P18828 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sdc1P18828 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sdc1P18828 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.24□□□□□ -1.73
Sdc1P18828 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sdc1P18828 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sdc1P18828 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.24□□□□□ -1.73
Sdc1P18828 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sdc1P18828 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sdc1P18828 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sdc1P18828 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.24□□□□□ -1.73
Sdc1P18828 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sdc1P18828 Gm7205-201ENSMUST00000196032 1323 ntBASIC4.23□□□□□ -1.73
Sdc1P18828 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sdc1P18828 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Sdc1P18828 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Sdc1P18828 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Sdc1P18828 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sdc1P18828 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sdc1P18828 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sdc1P18828 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Sdc1P18828 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sdc1P18828 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sdc1P18828 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sdc1P18828 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sdc1P18828 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
Sdc1P18828 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.23□□□□□ -1.73
Sdc1P18828 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
Sdc1P18828 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.23□□□□□ -1.73
Sdc1P18828 Gm12444-201ENSMUST00000121512 877 ntBASIC4.23□□□□□ -1.73
Sdc1P18828 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.23□□□□□ -1.73
Sdc1P18828 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC4.23□□□□□ -1.73
Sdc1P18828 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC4.23□□□□□ -1.73
Sdc1P18828 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC4.23□□□□□ -1.73
Sdc1P18828 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sdc1P18828 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sdc1P18828 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sdc1P18828 Gm23441-201ENSMUST00000157268 127 ntBASIC4.23□□□□□ -1.73
Sdc1P18828 Gm26321-201ENSMUST00000157740 242 ntBASIC4.23□□□□□ -1.73
Sdc1P18828 Gm22383-201ENSMUST00000158188 327 ntBASIC4.23□□□□□ -1.73
Sdc1P18828 Gm26731-201ENSMUST00000180683 543 ntBASIC4.23□□□□□ -1.73
Sdc1P18828 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC4.23□□□□□ -1.73
Sdc1P18828 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC4.23□□□□□ -1.73
Sdc1P18828 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sdc1P18828 Ighv8-3-201ENSMUST00000194985 295 ntBASIC4.23□□□□□ -1.73
Sdc1P18828 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.23□□□□□ -1.73
Sdc1P18828 Gm45276-201ENSMUST00000209549 1086 ntBASIC4.23□□□□□ -1.73
Sdc1P18828 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sdc1P18828 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sdc1P18828 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC4.23□□□□□ -1.73
Sdc1P18828 Gm6991-201ENSMUST00000218475 1178 ntBASIC4.23□□□□□ -1.73
Sdc1P18828 AC154634.3-201ENSMUST00000224589 736 ntBASIC4.23□□□□□ -1.73
Sdc1P18828 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sdc1P18828 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Sdc1P18828 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Sdc1P18828 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Sdc1P18828 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Sdc1P18828 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sdc1P18828 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Sdc1P18828 Gm24036-201ENSMUST00000082868 156 ntBASIC4.23□□□□□ -1.73
Sdc1P18828 Mir338-201ENSMUST00000083666 98 ntBASIC4.23□□□□□ -1.73
Sdc1P18828 Gm38190-201ENSMUST00000192350 4755 ntBASIC4.23□□□□□ -1.73
Sdc1P18828 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Sdc1P18828 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sdc1P18828 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sdc1P18828 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sdc1P18828 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.23□□□□□ -1.73
Sdc1P18828 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Sdc1P18828 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Sdc1P18828 Gm9923-201ENSMUST00000217785 1836 ntBASIC4.23□□□□□ -1.73
Sdc1P18828 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sdc1P18828 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC4.22□□□□□ -1.73
Sdc1P18828 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC4.22□□□□□ -1.73
Sdc1P18828 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sdc1P18828 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.22□□□□□ -1.73
Sdc1P18828 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sdc1P18828 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sdc1P18828 Gm23593-201ENSMUST00000104309 120 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sdc1P18828 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
Sdc1P18828 Gm4853-201ENSMUST00000119359 394 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Gm15181-201ENSMUST00000120142 177 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Gm15335-201ENSMUST00000122442 411 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC4.22□□□□□ -1.73
Sdc1P18828 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sdc1P18828 Gm22867-201ENSMUST00000157499 109 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Gm23902-201ENSMUST00000157571 134 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Gm26490-201ENSMUST00000157879 140 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Gm22730-201ENSMUST00000158085 171 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms