Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Gm22266-201ENSMUST00000104011 138 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Gm14756-201ENSMUST00000116395 240 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Gm20701-201ENSMUST00000176082 347 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Gm2497-201ENSMUST00000189539 601 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Gm18599-201ENSMUST00000206729 1125 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Gm37142-201ENSMUST00000193718 3110 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Gm38451-201ENSMUST00000208329 2646 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Gm37114-201ENSMUST00000195065 1804 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Gm14172-201ENSMUST00000118255 644 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Gm14881-201ENSMUST00000120366 372 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Mir6344-201ENSMUST00000183462 104 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Gm37632-201ENSMUST00000191811 1142 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Gm43418-201ENSMUST00000201334 428 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Gm44757-201ENSMUST00000206373 157 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 AC093022.3-201ENSMUST00000226569 1926 ntBASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a6Q8C6K9 Gm43333-201ENSMUST00000198340 2262 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Gm42496-201ENSMUST00000197976 3241 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Gm37127-201ENSMUST00000192924 3036 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Gm13733-201ENSMUST00000117290 535 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Gm15388-201ENSMUST00000121578 726 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Gm22916-201ENSMUST00000157616 119 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Gm24735-201ENSMUST00000158859 118 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Gm21909-201ENSMUST00000178260 439 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Gm45632-201ENSMUST00000211532 1888 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Gm16523-202ENSMUST00000203640 4750 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Gm12884-201ENSMUST00000120371 325 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Gm13808-201ENSMUST00000121353 184 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Esd-ps-201ENSMUST00000170684 847 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Gm27528-201ENSMUST00000183544 205 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Gm29781-201ENSMUST00000203862 478 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 AC121912.1-201ENSMUST00000227525 1201 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Olfr881-201ENSMUST00000074611 948 ntBASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a6Q8C6K9 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 AC115910.1-201ENSMUST00000221188 4275 ntBASIC4.65□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms