Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm27781-201ENSMUST00000185185 92 ntBASIC5.9□□□□□ -1.46
Brca1P48754 Gm42459-201ENSMUST00000199679 742 ntBASIC5.9□□□□□ -1.46
Brca1P48754 Gm43418-201ENSMUST00000201334 428 ntBASIC5.9□□□□□ -1.46
Brca1P48754 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.9□□□□□ -1.46
Brca1P48754 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.9□□□□□ -1.46
Brca1P48754 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.9□□□□□ -1.46
Brca1P48754 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.9□□□□□ -1.46
Brca1P48754 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Brca1P48754 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Brca1P48754 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Brca1P48754 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Brca1P48754 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.46
Brca1P48754 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Brca1P48754 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.9□□□□□ -1.47
Brca1P48754 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Brca1P48754 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Brca1P48754 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Brca1P48754 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Brca1P48754 Gm24235-201ENSMUST00000104319 129 ntBASIC5.9□□□□□ -1.47
Brca1P48754 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Brca1P48754 Gm11878-201ENSMUST00000117908 400 ntBASIC5.9□□□□□ -1.47
Brca1P48754 Gm13367-201ENSMUST00000119955 796 ntBASIC5.9□□□□□ -1.47
Brca1P48754 Gm14037-201ENSMUST00000120576 313 ntBASIC5.9□□□□□ -1.47
Brca1P48754 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC5.9□□□□□ -1.47
Brca1P48754 Gm13745-201ENSMUST00000121994 527 ntBASIC5.9□□□□□ -1.47
Brca1P48754 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.9□□□□□ -1.47
Brca1P48754 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Brca1P48754 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.9□□□□□ -1.47
Brca1P48754 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Brca1P48754 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.9□□□□□ -1.47
Brca1P48754 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.9□□□□□ -1.47
Brca1P48754 Gm44412-201ENSMUST00000203018 294 ntBASIC5.9□□□□□ -1.47
Brca1P48754 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
Brca1P48754 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Brca1P48754 Gm45628-201ENSMUST00000210849 274 ntBASIC5.9□□□□□ -1.47
Brca1P48754 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Brca1P48754 CT030194.1-201ENSMUST00000225507 532 ntBASIC5.9□□□□□ -1.47
Brca1P48754 Gm5215-201ENSMUST00000054380 405 ntBASIC5.9□□□□□ -1.47
Brca1P48754 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Brca1P48754 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Brca1P48754 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Brca1P48754 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
Brca1P48754 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.89□□□□□ -1.47
Brca1P48754 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Brca1P48754 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Brca1P48754 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.89□□□□□ -1.47
Brca1P48754 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Brca1P48754 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Brca1P48754 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.89□□□□□ -1.47
Brca1P48754 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Brca1P48754 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Brca1P48754 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.89□□□□□ -1.47
Brca1P48754 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.89□□□□□ -1.47
Brca1P48754 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Brca1P48754 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
Brca1P48754 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Brca1P48754 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.89□□□□□ -1.47
Brca1P48754 Gm17014-201ENSMUST00000120765 168 ntBASIC5.89□□□□□ -1.47
Brca1P48754 Gm24113-201ENSMUST00000157477 276 ntBASIC5.89□□□□□ -1.47
Brca1P48754 Gm20701-201ENSMUST00000176082 347 ntBASIC5.89□□□□□ -1.47
Brca1P48754 Mir3620-201ENSMUST00000184710 61 ntBASIC5.89□□□□□ -1.47
Brca1P48754 Gm27760-201ENSMUST00000185048 114 ntBASIC5.89□□□□□ -1.47
Brca1P48754 Gm37272-201ENSMUST00000193401 488 ntBASIC5.89□□□□□ -1.47
Brca1P48754 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.89□□□□□ -1.47
Brca1P48754 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Brca1P48754 AC183096.1-201ENSMUST00000226392 130 ntBASIC5.89□□□□□ -1.47
Brca1P48754 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Brca1P48754 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
Brca1P48754 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.89□□□□□ -1.47
Brca1P48754 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Brca1P48754 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.89□□□□□ -1.47
Brca1P48754 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.89□□□□□ -1.47
Brca1P48754 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.89□□□□□ -1.47
Brca1P48754 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.89□□□□□ -1.47
Brca1P48754 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Brca1P48754 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Brca1P48754 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.89□□□□□ -1.47
Brca1P48754 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Brca1P48754 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.88□□□□□ -1.47
Brca1P48754 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Brca1P48754 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Brca1P48754 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
Brca1P48754 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Brca1P48754 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Brca1P48754 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.88□□□□□ -1.47
Brca1P48754 Gm11790-201ENSMUST00000119569 455 ntBASIC5.88□□□□□ -1.47
Brca1P48754 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Brca1P48754 Gm5699-201ENSMUST00000152491 723 ntBASIC5.88□□□□□ -1.47
Brca1P48754 Gm22804-201ENSMUST00000158052 101 ntBASIC5.88□□□□□ -1.47
Brca1P48754 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.88□□□□□ -1.47
Brca1P48754 Mir6412-201ENSMUST00000184477 97 ntBASIC5.88□□□□□ -1.47
Brca1P48754 Gm4602-201ENSMUST00000203198 308 ntBASIC5.88□□□□□ -1.47
Brca1P48754 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.88□□□□□ -1.47
Brca1P48754 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.88□□□□□ -1.47
Brca1P48754 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.88□□□□□ -1.47
Brca1P48754 Desi2-202ENSMUST00000069568 1193 ntBASIC5.88□□□□□ -1.47
Brca1P48754 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.88□□□□□ -1.47
Brca1P48754 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Brca1P48754 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Brca1P48754 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms