Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm25224-201ENSMUST00000158195 68 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Col18a1P39061 Gm4412-201ENSMUST00000186660 433 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 Ighv6-2-201ENSMUST00000192430 295 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 Gm17937-201ENSMUST00000197908 742 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 Gm6070-201ENSMUST00000207275 419 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Col18a1P39061 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC7.38□□□□□ -1.23
Col18a1P39061 AC192616.1-201ENSMUST00000221922 132 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 CT030254.3-201ENSMUST00000225959 1231 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col18a1P39061 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC7.38□□□□□ -1.23
Col18a1P39061 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col18a1P39061 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Col18a1P39061 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Col18a1P39061 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col18a1P39061 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col18a1P39061 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col18a1P39061 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
Col18a1P39061 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col18a1P39061 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col18a1P39061 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col18a1P39061 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col18a1P39061 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC7.37□□□□□ -1.23
Col18a1P39061 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col18a1P39061 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col18a1P39061 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col18a1P39061 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col18a1P39061 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC7.37□□□□□ -1.23
Col18a1P39061 Mir1193-201ENSMUST00000116761 121 ntBASIC7.37□□□□□ -1.23
Col18a1P39061 Gm11633-201ENSMUST00000118176 444 ntBASIC7.37□□□□□ -1.23
Col18a1P39061 Gm14945-201ENSMUST00000119556 1118 ntBASIC7.37□□□□□ -1.23
Col18a1P39061 Mup-ps18-201ENSMUST00000120145 531 ntBASIC7.37□□□□□ -1.23
Col18a1P39061 Gm9435-201ENSMUST00000120379 877 ntBASIC7.37□□□□□ -1.23
Col18a1P39061 Gm25047-201ENSMUST00000122667 104 ntBASIC7.37□□□□□ -1.23
Col18a1P39061 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col18a1P39061 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC7.37□□□□□ -1.23
Col18a1P39061 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Col18a1P39061 Gm23508-201ENSMUST00000083079 72 ntBASIC7.37□□□□□ -1.23
Col18a1P39061 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Col18a1P39061 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Col18a1P39061 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
Col18a1P39061 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Col18a1P39061 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col18a1P39061 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col18a1P39061 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col18a1P39061 Gm3978-201ENSMUST00000163406 2512 ntBASIC7.37□□□□□ -1.23
Col18a1P39061 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Col18a1P39061 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col18a1P39061 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col18a1P39061 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col18a1P39061 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col18a1P39061 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col18a1P39061 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Col18a1P39061 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC7.36□□□□□ -1.23
Col18a1P39061 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col18a1P39061 Gm13737-201ENSMUST00000119793 232 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 Gm6062-201ENSMUST00000120462 631 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 Gm26254-201ENSMUST00000122491 118 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col18a1P39061 Gm23059-201ENSMUST00000158978 107 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 Gm8214-201ENSMUST00000172123 351 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC7.36□□□□□ -1.23
Col18a1P39061 Gm37209-201ENSMUST00000194109 1276 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 Gm6719-201ENSMUST00000202067 335 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 Gm44712-201ENSMUST00000206250 1076 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 AC161609.1-201ENSMUST00000225878 474 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 AC112142.1-206ENSMUST00000228136 982 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col18a1P39061 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC7.36□□□□□ -1.23
Col18a1P39061 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Col18a1P39061 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Col18a1P39061 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
Col18a1P39061 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Col18a1P39061 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col18a1P39061 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Col18a1P39061 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC7.36□□□□□ -1.23
Col18a1P39061 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC7.36□□□□□ -1.23
Col18a1P39061 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col18a1P39061 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col18a1P39061 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Col18a1P39061 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col18a1P39061 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Col18a1P39061 Gm43611-201ENSMUST00000196656 4352 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 Gm15297-201ENSMUST00000117795 290 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 Gm15400-201ENSMUST00000118944 601 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 Gm11625-201ENSMUST00000119535 296 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 Gm5809-201ENSMUST00000121854 529 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 Gm6542-201ENSMUST00000153606 772 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 Gm23993-201ENSMUST00000157478 144 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 Gm27611-201ENSMUST00000184690 108 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 Gm4854-201ENSMUST00000185902 574 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col18a1P39061 Gm29064-201ENSMUST00000187014 813 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col18a1P39061 Gm18861-201ENSMUST00000202509 1186 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 AC118230.1-201ENSMUST00000220196 656 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms