Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.45□□□□□ -1.7
Cdx1P18111 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx1P18111 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.45□□□□□ -1.7
Cdx1P18111 Gm25966-201ENSMUST00000157169 117 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Gm25459-201ENSMUST00000157953 114 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx1P18111 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC4.45□□□□□ -1.7
Cdx1P18111 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx1P18111 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC4.45□□□□□ -1.7
Cdx1P18111 Gm21756-201ENSMUST00000178380 930 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Gm2058-201ENSMUST00000178791 560 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Gm21405-201ENSMUST00000179024 930 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Cdx1P18111 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx1P18111 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx1P18111 Gm21191-201ENSMUST00000186484 930 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC4.45□□□□□ -1.7
Cdx1P18111 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx1P18111 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx1P18111 Gm29503-201ENSMUST00000191044 930 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Ighv6-2-201ENSMUST00000192430 295 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Gm18427-201ENSMUST00000195422 515 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.45□□□□□ -1.7
Cdx1P18111 Gm43044-201ENSMUST00000198091 379 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cdx1P18111 Gm42886-201ENSMUST00000199214 466 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC4.45□□□□□ -1.7
Cdx1P18111 AC079644.1-201ENSMUST00000220586 405 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Gm46996-201ENSMUST00000220924 408 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Gm3086-202ENSMUST00000221248 310 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx1P18111 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 CT025579.3-201ENSMUST00000224543 451 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 AC122393.2-201ENSMUST00000226404 1093 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 AC140209.1-204ENSMUST00000226736 739 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cdx1P18111 Gm6776-201ENSMUST00000057752 900 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx1P18111 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx1P18111 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cdx1P18111 Defa-ps18-201ENSMUST00000098889 371 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Zfp850-201ENSMUST00000099111 941 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Gm44695-201ENSMUST00000205567 1631 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Cdx1P18111 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx1P18111 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx1P18111 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Cdx1P18111 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
Cdx1P18111 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cdx1P18111 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Cdx1P18111 Gm38190-201ENSMUST00000192350 4755 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.44□□□□□ -1.7
Cdx1P18111 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx1P18111 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Cdx1P18111 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm37569-201ENSMUST00000192111 1722 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx1P18111 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx1P18111 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Cdx1P18111 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Cdx1P18111 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx1P18111 Gm43745-201ENSMUST00000198085 1883 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx1P18111 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Cdx1P18111 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Cdx1P18111 Gm14788-201ENSMUST00000119457 375 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm13787-201ENSMUST00000120422 168 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm13489-201ENSMUST00000121234 971 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm8761-201ENSMUST00000121507 955 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm14349-201ENSMUST00000137155 902 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx1P18111 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx1P18111 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Cdx1P18111 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Cdx1P18111 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm7745-201ENSMUST00000182235 973 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Mir6412-201ENSMUST00000184477 97 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm27781-201ENSMUST00000185185 92 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm8367-201ENSMUST00000186145 887 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm8419-201ENSMUST00000189886 412 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Ighv1-44-201ENSMUST00000195597 352 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC4.44□□□□□ -1.7
Cdx1P18111 Gm43779-201ENSMUST00000196691 829 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm31211-201ENSMUST00000199170 253 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm18290-201ENSMUST00000202900 844 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm43925-201ENSMUST00000203498 206 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm45082-201ENSMUST00000206082 601 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC4.44□□□□□ -1.7
Cdx1P18111 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.44□□□□□ -1.7
Cdx1P18111 Gm5457-201ENSMUST00000022260 333 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx1P18111 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 AC154595.2-201ENSMUST00000225067 310 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms