Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm2223-201ENSMUST00000112099 1350 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm37906-201ENSMUST00000192050 3035 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm24430-201ENSMUST00000104077 104 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm25917-201ENSMUST00000104267 130 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm23440-201ENSMUST00000104299 130 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm7834-201ENSMUST00000117560 437 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm15332-201ENSMUST00000118386 357 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm11881-201ENSMUST00000119408 572 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm16100-201ENSMUST00000120489 231 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm13430-201ENSMUST00000121366 288 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm12332-201ENSMUST00000121397 922 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Llph-ps2-201ENSMUST00000122000 393 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm24628-201ENSMUST00000122761 289 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm22820-201ENSMUST00000157205 329 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm23030-201ENSMUST00000158004 273 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm17142-201ENSMUST00000164933 645 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Mir6238-201ENSMUST00000184140 129 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm37493-201ENSMUST00000193167 433 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm37341-201ENSMUST00000194680 371 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Ighv1-44-201ENSMUST00000195597 352 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC6.95□□□□□ -1.3
Clp1Q99LI9 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Gm23516-201ENSMUST00000093728 107 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Clp1Q99LI9 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.95□□□□□ -1.3
Clp1Q99LI9 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Clp1Q99LI9 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm26067-201ENSMUST00000103789 110 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm13930-201ENSMUST00000118569 368 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm11512-201ENSMUST00000119669 663 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm12607-201ENSMUST00000120724 493 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm14411-201ENSMUST00000121798 914 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm7973-201ENSMUST00000122107 488 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Snora47-201ENSMUST00000157483 138 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm23539-201ENSMUST00000157537 224 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm25667-201ENSMUST00000157701 275 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm26357-201ENSMUST00000158218 115 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm26211-201ENSMUST00000158578 129 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Mir5106-201ENSMUST00000174936 73 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Mir3097-201ENSMUST00000175356 67 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms