Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mir465c-1-201ENSMUST00000093560 81 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Sox1P53783 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC6.66□□□□□ -1.34
Sox1P53783 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Sox1P53783 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Sox1P53783 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Gm13100-201ENSMUST00000117157 1439 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Gm42841-201ENSMUST00000199806 1932 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Sox1P53783 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
Sox1P53783 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.65□□□□□ -1.34
Sox1P53783 Gm37924-201ENSMUST00000195470 3647 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Gm42490-201ENSMUST00000198595 2064 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sox1P53783 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Gm37790-201ENSMUST00000193136 3346 ntBASIC6.65□□□□□ -1.34
Sox1P53783 CT009734.1-201ENSMUST00000227657 1687 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sox1P53783 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sox1P53783 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Sox1P53783 Gm18313-201ENSMUST00000221036 1784 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Sox1P53783 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Sox1P53783 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sox1P53783 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Sox1P53783 Gm22592-201ENSMUST00000104242 131 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Gm22952-201ENSMUST00000116720 120 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Gm13811-201ENSMUST00000117800 256 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Sox1P53783 Gm12303-201ENSMUST00000119506 673 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Gm16074-201ENSMUST00000119524 444 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Gm14175-201ENSMUST00000119835 241 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Gm13024-201ENSMUST00000121756 718 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Gm15237-201ENSMUST00000122104 469 ntBASIC6.65□□□□□ -1.34
Sox1P53783 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sox1P53783 Gm22841-201ENSMUST00000158443 62 ntBASIC6.65□□□□□ -1.34
Sox1P53783 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sox1P53783 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Sox1P53783 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Sox1P53783 Mir3080-201ENSMUST00000175010 79 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Gm22355-201ENSMUST00000175531 96 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Sox1P53783 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC6.65□□□□□ -1.34
Sox1P53783 Gm9892-201ENSMUST00000182415 992 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Mir6341-201ENSMUST00000183490 121 ntBASIC6.65□□□□□ -1.34
Sox1P53783 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Sox1P53783 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Sox1P53783 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Sox1P53783 Gm18702-201ENSMUST00000196923 588 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Gm44403-201ENSMUST00000198554 129 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Gm19457-201ENSMUST00000200995 448 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Sox1P53783 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Sox1P53783 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.65□□□□□ -1.34
Sox1P53783 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC6.65□□□□□ -1.34
Sox1P53783 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Sox1P53783 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Sox1P53783 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sox1P53783 n-R5s204-201ENSMUST00000082972 119 ntBASIC6.65□□□□□ -1.34
Sox1P53783 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Sox1P53783 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sox1P53783 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Sox1P53783 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Sox1P53783 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Sox1P53783 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Sox1P53783 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
Sox1P53783 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Sox1P53783 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Sox1P53783 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Sox1P53783 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.35
Sox1P53783 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Sox1P53783 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Sox1P53783 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Sox1P53783 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Sox1P53783 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Sox1P53783 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
Sox1P53783 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Sox1P53783 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Sox1P53783 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Sox1P53783 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
Sox1P53783 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Sox1P53783 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms