Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm27596-201ENSMUST00000185061 83 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm44611-201ENSMUST00000207507 355 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm45478-201ENSMUST00000209472 211 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm45900-201ENSMUST00000211879 409 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 AC159256.1-201ENSMUST00000224298 1039 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 AC117769.2-201ENSMUST00000224612 469 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 CT025689.4-201ENSMUST00000225926 601 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 AC122341.1-201ENSMUST00000227291 560 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm22572-201ENSMUST00000082985 105 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm24928-201ENSMUST00000083399 107 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm25897-201ENSMUST00000083709 107 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm4017-201ENSMUST00000084813 338 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm6177-201ENSMUST00000085589 465 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Hoxd3P09027 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Hoxd3P09027 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm37403-201ENSMUST00000193775 3521 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Hoxd3P09027 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Hoxd3P09027 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm42680-201ENSMUST00000196238 2500 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Hoxd3P09027 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm2065-201ENSMUST00000194697 2757 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Hoxd3P09027 Gm42514-201ENSMUST00000196636 1832 ntBASIC5.71□□□□□ -1.49
Hoxd3P09027 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Hoxd3P09027 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Hoxd3P09027 Gm38302-201ENSMUST00000191676 2076 ntBASIC5.71□□□□□ -1.49
Hoxd3P09027 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Hoxd3P09027 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Hoxd3P09027 AC122769.1-201ENSMUST00000226930 1714 ntBASIC5.71□□□□□ -1.49
Hoxd3P09027 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Hoxd3P09027 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Hoxd3P09027 AC154482.1-201ENSMUST00000223248 2483 ntBASIC5.71□□□□□ -1.49
Hoxd3P09027 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Hoxd3P09027 Gm14802-201ENSMUST00000121944 1885 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd3P09027 AC107742.1-201ENSMUST00000227769 1390 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Hoxd3P09027 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm20731-201ENSMUST00000193462 2288 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd3P09027 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm25757-201ENSMUST00000103986 123 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Hoxd3P09027 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Hoxd3P09027 Mir466i-201ENSMUST00000116924 121 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm9311-201ENSMUST00000118042 1269 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm12787-201ENSMUST00000119234 396 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm8916-201ENSMUST00000119732 949 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd3P09027 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm23124-201ENSMUST00000157650 107 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm25706-201ENSMUST00000157828 247 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm22136-201ENSMUST00000158751 268 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm6931-201ENSMUST00000183103 371 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm29334-201ENSMUST00000190334 357 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm37758-201ENSMUST00000194275 629 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm33973-201ENSMUST00000195148 534 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm38079-201ENSMUST00000195603 154 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm43083-201ENSMUST00000199594 476 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm44192-201ENSMUST00000204195 556 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm5324-201ENSMUST00000208115 476 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.71□□□□□ -1.5
Hoxd3P09027 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC5.71□□□□□ -1.5
Hoxd3P09027 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm8785-201ENSMUST00000220259 487 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm9321-201ENSMUST00000221179 778 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms