Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Gm37581-201ENSMUST00000192371 988 ntBASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Gm24525-201ENSMUST00000082917 151 ntBASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Gm23459-201ENSMUST00000083259 131 ntBASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Mir133b-201ENSMUST00000083546 119 ntBASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 AC153959.1-201ENSMUST00000213617 1694 ntBASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.5□□□□□ -1.53
Chmp2aQ9DB34 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Gm14587-201ENSMUST00000121714 658 ntBASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Gm25176-201ENSMUST00000122640 125 ntBASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Mir1963-201ENSMUST00000158594 59 ntBASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Gm37445-201ENSMUST00000195318 242 ntBASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Gm19921-201ENSMUST00000210505 703 ntBASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.49□□□□□ -1.53
Chmp2aQ9DB34 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Gm24350-201ENSMUST00000104163 133 ntBASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Gm13367-201ENSMUST00000119955 796 ntBASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Gm12110-201ENSMUST00000121601 579 ntBASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Gm27849-201ENSMUST00000183673 125 ntBASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Gm2325-201ENSMUST00000186637 581 ntBASIC5.48□□□□□ -1.53
Chmp2aQ9DB34 Gm6137-201ENSMUST00000187552 578 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms