Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Gm13363-201ENSMUST00000122008 522 ntBASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Gm29576-201ENSMUST00000188020 678 ntBASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Gm28354-201ENSMUST00000190904 678 ntBASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Gm30280-201ENSMUST00000192214 262 ntBASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Gm42776-201ENSMUST00000198031 406 ntBASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.09□□□□□ -1.59
Cdh23Q99PF4 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Gm14854-201ENSMUST00000117758 841 ntBASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Gm14909-201ENSMUST00000117853 351 ntBASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Gm12322-201ENSMUST00000121605 389 ntBASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Gm15038-201ENSMUST00000122144 296 ntBASIC5.09□□□□□ -1.59
Cdh23Q99PF4 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Mir129b-201ENSMUST00000197461 65 ntBASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Cdh23Q99PF4 AC120347.2-201ENSMUST00000222224 2015 ntBASIC5.09□□□□□ -1.59
Cdh23Q99PF4 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.09□□□□□ -1.6
Cdh23Q99PF4 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
Cdh23Q99PF4 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.6
Cdh23Q99PF4 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Cdh23Q99PF4 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
Cdh23Q99PF4 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.09□□□□□ -1.6
Cdh23Q99PF4 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC5.09□□□□□ -1.6
Cdh23Q99PF4 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.6
Cdh23Q99PF4 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Cdh23Q99PF4 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Cdh23Q99PF4 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Gm6079-201ENSMUST00000121356 404 ntBASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Gm6542-201ENSMUST00000153606 772 ntBASIC5.08□□□□□ -1.6
Cdh23Q99PF4 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.08□□□□□ -1.6
Cdh23Q99PF4 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Gm26219-201ENSMUST00000175216 71 ntBASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Gm27883-201ENSMUST00000183941 102 ntBASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.08□□□□□ -1.6
Cdh23Q99PF4 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.08□□□□□ -1.6
Cdh23Q99PF4 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 St3gal1-201ENSMUST00000092640 4985 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdh23Q99PF4 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.07□□□□□ -1.6
Cdh23Q99PF4 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cdh23Q99PF4 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdh23Q99PF4 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdh23Q99PF4 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cdh23Q99PF4 Gm43099-201ENSMUST00000198943 5241 ntBASIC5.07□□□□□ -1.6
Cdh23Q99PF4 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdh23Q99PF4 Gm11698-201ENSMUST00000117948 455 ntBASIC5.07□□□□□ -1.6
Cdh23Q99PF4 Gm15390-201ENSMUST00000120323 738 ntBASIC5.07□□□□□ -1.6
Cdh23Q99PF4 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC5.07□□□□□ -1.6
Cdh23Q99PF4 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdh23Q99PF4 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.07□□□□□ -1.6
Cdh23Q99PF4 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC5.07□□□□□ -1.6
Cdh23Q99PF4 AC159886.1-201ENSMUST00000217099 1091 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms