Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm16274-201ENSMUST00000139251 592 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm24719-201ENSMUST00000157520 110 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm22733-201ENSMUST00000158094 91 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm23632-201ENSMUST00000175289 125 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Clp1Q99LI9 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm27036-201ENSMUST00000182465 980 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm36448-201ENSMUST00000199916 438 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm8189-203ENSMUST00000211159 1225 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm21041-201ENSMUST00000214829 823 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm7495-201ENSMUST00000215099 426 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm18774-201ENSMUST00000218269 601 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Clp1Q99LI9 AC110381.1-201ENSMUST00000218987 586 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm12582-201ENSMUST00000030555 697 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm43681-201ENSMUST00000201581 1903 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Clp1Q99LI9 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
Clp1Q99LI9 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Clp1Q99LI9 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Clp1Q99LI9 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Clp1Q99LI9 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Clp1Q99LI9 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.96□□□□□ -1.3
Clp1Q99LI9 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm23431-201ENSMUST00000104006 107 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm26079-201ENSMUST00000104066 133 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm13114-201ENSMUST00000117605 106 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm11198-201ENSMUST00000119771 974 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm24733-201ENSMUST00000158863 253 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm24179-201ENSMUST00000158925 127 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm20612-201ENSMUST00000176318 236 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm6113-201ENSMUST00000180319 639 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm19154-201ENSMUST00000223330 940 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 AC165283.1-201ENSMUST00000223390 307 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 AL590614.1-201ENSMUST00000226037 268 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm37790-201ENSMUST00000193136 3346 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm336-201ENSMUST00000186376 1480 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Clp1Q99LI9 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.96□□□□□ -1.3
Clp1Q99LI9 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Clp1Q99LI9 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms