Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.12□□□□□ -1.43
Msx2Q03358 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.12□□□□□ -1.43
Msx2Q03358 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Msx2Q03358 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Msx2Q03358 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Msx2Q03358 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Msx2Q03358 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Msx2Q03358 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Msx2Q03358 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Msx2Q03358 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Msx2Q03358 Gm23242-201ENSMUST00000083055 107 ntBASIC6.12□□□□□ -1.43
Msx2Q03358 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Msx2Q03358 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Msx2Q03358 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Msx2Q03358 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msx2Q03358 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msx2Q03358 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm38264-201ENSMUST00000194850 2032 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 AC127371.2-201ENSMUST00000228108 1933 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Msx2Q03358 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msx2Q03358 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm11859-201ENSMUST00000118099 455 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Gm15149-201ENSMUST00000119370 360 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm15193-201ENSMUST00000120224 865 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Gm15586-201ENSMUST00000121218 528 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Gm14515-201ENSMUST00000121327 216 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Gm13743-201ENSMUST00000121486 724 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm22361-201ENSMUST00000158435 176 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Gm16113-201ENSMUST00000159629 372 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Gm17060-201ENSMUST00000172394 824 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Msx2Q03358 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Msx2Q03358 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm8860-201ENSMUST00000193160 445 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm43383-201ENSMUST00000195981 469 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.11□□□□□ -1.43
Msx2Q03358 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm4525-201ENSMUST00000198831 254 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Gm7452-201ENSMUST00000200764 788 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Gm43850-201ENSMUST00000202021 578 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC6.11□□□□□ -1.43
Msx2Q03358 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm45070-201ENSMUST00000208100 246 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm45888-201ENSMUST00000212348 1229 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm8275-201ENSMUST00000219732 424 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC6.11□□□□□ -1.43
Msx2Q03358 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Msx2Q03358 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msx2Q03358 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msx2Q03358 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msx2Q03358 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm25004-201ENSMUST00000083811 161 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Gm26107-201ENSMUST00000083972 107 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.11□□□□□ -1.43
Msx2Q03358 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.11□□□□□ -1.43
Msx2Q03358 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msx2Q03358 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Msx2Q03358 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msx2Q03358 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Msx2Q03358 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Msx2Q03358 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Msx2Q03358 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 AC115891.1-201ENSMUST00000215798 1755 ntBASIC6.11□□□□□ -1.43
Msx2Q03358 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC6.11□□□□□ -1.43
Msx2Q03358 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC6.11□□□□□ -1.43
Msx2Q03358 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Msx2Q03358 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC6.1□□□□□ -1.43
Msx2Q03358 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Msx2Q03358 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Msx2Q03358 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Msx2Q03358 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Msx2Q03358 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Msx2Q03358 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Msx2Q03358 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Msx2Q03358 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Msx2Q03358 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Msx2Q03358 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Msx2Q03358 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.1□□□□□ -1.43
Msx2Q03358 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Msx2Q03358 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Msx2Q03358 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Msx2Q03358 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 106.9 ms