Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NcanP55066 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NcanP55066 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NcanP55066 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NcanP55066 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NcanP55066 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NcanP55066 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NcanP55066 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.82□□□□□ -1.48
NcanP55066 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NcanP55066 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
NcanP55066 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NcanP55066 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NcanP55066 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NcanP55066 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NcanP55066 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NcanP55066 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.82□□□□□ -1.48
NcanP55066 Gm25726-201ENSMUST00000104529 129 ntBASIC5.82□□□□□ -1.48
NcanP55066 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC5.82□□□□□ -1.48
NcanP55066 Gm14791-201ENSMUST00000119061 1166 ntBASIC5.82□□□□□ -1.48
NcanP55066 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NcanP55066 Gm14125-202ENSMUST00000120921 756 ntBASIC5.82□□□□□ -1.48
NcanP55066 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NcanP55066 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.82□□□□□ -1.48
NcanP55066 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
NcanP55066 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NcanP55066 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NcanP55066 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.82□□□□□ -1.48
NcanP55066 Gm26167-201ENSMUST00000158423 253 ntBASIC5.82□□□□□ -1.48
NcanP55066 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NcanP55066 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC5.82□□□□□ -1.48
NcanP55066 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC5.82□□□□□ -1.48
NcanP55066 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.82□□□□□ -1.48
NcanP55066 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC5.82□□□□□ -1.48
NcanP55066 Gm20773-201ENSMUST00000178940 681 ntBASIC5.82□□□□□ -1.48
NcanP55066 Gm29196-201ENSMUST00000189239 618 ntBASIC5.82□□□□□ -1.48
NcanP55066 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.82□□□□□ -1.48
NcanP55066 Gm37088-201ENSMUST00000193887 406 ntBASIC5.82□□□□□ -1.48
NcanP55066 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.82□□□□□ -1.48
NcanP55066 Gm44852-201ENSMUST00000207950 369 ntBASIC5.82□□□□□ -1.48
NcanP55066 Gm3912-203ENSMUST00000211024 367 ntBASIC5.82□□□□□ -1.48
NcanP55066 Gm6362-201ENSMUST00000217686 836 ntBASIC5.82□□□□□ -1.48
NcanP55066 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.82□□□□□ -1.48
NcanP55066 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.82□□□□□ -1.48
NcanP55066 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NcanP55066 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NcanP55066 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NcanP55066 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NcanP55066 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.82□□□□□ -1.48
NcanP55066 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NcanP55066 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NcanP55066 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NcanP55066 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.82□□□□□ -1.48
NcanP55066 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NcanP55066 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NcanP55066 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.82□□□□□ -1.48
NcanP55066 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
NcanP55066 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NcanP55066 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NcanP55066 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NcanP55066 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.81□□□□□ -1.48
NcanP55066 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.81□□□□□ -1.48
NcanP55066 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NcanP55066 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.81□□□□□ -1.48
NcanP55066 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NcanP55066 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NcanP55066 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NcanP55066 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.81□□□□□ -1.48
NcanP55066 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NcanP55066 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NcanP55066 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NcanP55066 Gm11931-201ENSMUST00000121630 447 ntBASIC5.81□□□□□ -1.48
NcanP55066 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.81□□□□□ -1.48
NcanP55066 Gm22792-201ENSMUST00000157225 133 ntBASIC5.81□□□□□ -1.48
NcanP55066 Gm24217-201ENSMUST00000158260 133 ntBASIC5.81□□□□□ -1.48
NcanP55066 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC5.81□□□□□ -1.48
NcanP55066 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.81□□□□□ -1.48
NcanP55066 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NcanP55066 Mir6414-201ENSMUST00000183685 82 ntBASIC5.81□□□□□ -1.48
NcanP55066 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NcanP55066 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.81□□□□□ -1.48
NcanP55066 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.81□□□□□ -1.48
NcanP55066 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.81□□□□□ -1.48
NcanP55066 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC5.81□□□□□ -1.48
NcanP55066 Gm36986-201ENSMUST00000195320 353 ntBASIC5.81□□□□□ -1.48
NcanP55066 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.81□□□□□ -1.48
NcanP55066 Gm44650-201ENSMUST00000206929 194 ntBASIC5.81□□□□□ -1.48
NcanP55066 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.81□□□□□ -1.48
NcanP55066 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NcanP55066 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NcanP55066 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NcanP55066 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NcanP55066 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NcanP55066 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NcanP55066 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NcanP55066 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NcanP55066 Gm37033-201ENSMUST00000193199 7350 ntBASIC5.81□□□□□ -1.48
NcanP55066 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NcanP55066 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.81□□□□□ -1.48
NcanP55066 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NcanP55066 Gm37183-201ENSMUST00000191712 3405 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms