Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm16259-201ENSMUST00000145241 553 ntBASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Gm17081-201ENSMUST00000167363 478 ntBASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nup98Q6PFD9 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nup98Q6PFD9 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Gm7840-201ENSMUST00000122086 533 ntBASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Gm26950-201ENSMUST00000182734 498 ntBASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Nup98Q6PFD9 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Gm43919-201ENSMUST00000204303 364 ntBASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Gm8137-201ENSMUST00000218997 463 ntBASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Gm18601-201ENSMUST00000220831 634 ntBASIC6.12□□□□□ -1.43
Nup98Q6PFD9 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Gm25260-201ENSMUST00000083053 134 ntBASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Gm23796-201ENSMUST00000084011 160 ntBASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Nup98Q6PFD9 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Gm19552-201ENSMUST00000194744 2833 ntBASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nup98Q6PFD9 AC117608.2-201ENSMUST00000224124 1363 ntBASIC6.12□□□□□ -1.43
Nup98Q6PFD9 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Gm12285-201ENSMUST00000117347 233 ntBASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Gm37719-201ENSMUST00000194615 292 ntBASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Gm42720-201ENSMUST00000196813 300 ntBASIC6.11□□□□□ -1.43
Nup98Q6PFD9 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Gm46191-201ENSMUST00000218899 433 ntBASIC6.11□□□□□ -1.43
Nup98Q6PFD9 AC127279.1-201ENSMUST00000220140 637 ntBASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 AC139218.1-201ENSMUST00000228215 4287 ntBASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Gm6503-201ENSMUST00000210829 2225 ntBASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Gm12131-201ENSMUST00000117479 359 ntBASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC6.11□□□□□ -1.43
Nup98Q6PFD9 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Gm45228-201ENSMUST00000206585 352 ntBASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC6.11□□□□□ -1.43
Nup98Q6PFD9 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 AC125543.1-201ENSMUST00000222778 101 ntBASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Nup98Q6PFD9 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nup98Q6PFD9 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Gm22899-201ENSMUST00000104540 131 ntBASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms