Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC6.69□□□□□ -1.34
Sox1P53783 Gm42540-201ENSMUST00000200319 2008 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Sox1P53783 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC6.69□□□□□ -1.34
Sox1P53783 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sox1P53783 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sox1P53783 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sox1P53783 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sox1P53783 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.68□□□□□ -1.34
Sox1P53783 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox1P53783 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox1P53783 Gm6786-201ENSMUST00000203165 1915 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox1P53783 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Sox1P53783 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox1P53783 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox1P53783 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
Sox1P53783 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox1P53783 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Sox1P53783 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.68□□□□□ -1.34
Sox1P53783 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox1P53783 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox1P53783 Gm13803-201ENSMUST00000117547 489 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm14352-201ENSMUST00000119250 449 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm14506-201ENSMUST00000121165 536 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm12332-201ENSMUST00000121397 922 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm24628-201ENSMUST00000122761 289 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC6.68□□□□□ -1.34
Sox1P53783 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.68□□□□□ -1.34
Sox1P53783 Gm22038-201ENSMUST00000157277 242 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm24731-201ENSMUST00000158227 131 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm23050-201ENSMUST00000158775 165 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm17060-201ENSMUST00000172394 824 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC6.68□□□□□ -1.34
Sox1P53783 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm26057-201ENSMUST00000178099 165 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm27018-201ENSMUST00000181136 225 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm26923-201ENSMUST00000182615 996 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm28596-201ENSMUST00000185870 696 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm29197-201ENSMUST00000185922 702 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm28149-201ENSMUST00000187102 378 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC6.68□□□□□ -1.34
Sox1P53783 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC6.68□□□□□ -1.34
Sox1P53783 Gm28768-201ENSMUST00000189034 378 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm32295-201ENSMUST00000192558 696 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm31260-201ENSMUST00000193478 696 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm37681-201ENSMUST00000193880 727 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm44225-201ENSMUST00000203582 186 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm8774-201ENSMUST00000203621 692 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm45122-201ENSMUST00000206376 784 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm45226-201ENSMUST00000206602 288 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm29920-201ENSMUST00000206876 754 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox1P53783 Gm9292-201ENSMUST00000222008 710 ntBASIC6.68□□□□□ -1.34
Sox1P53783 AC124569.1-201ENSMUST00000225932 101 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
Sox1P53783 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox1P53783 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Sox1P53783 Gm7204-201ENSMUST00000062591 600 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Sox1P53783 Gm23452-201ENSMUST00000083327 107 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox1P53783 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox1P53783 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox1P53783 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox1P53783 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox1P53783 AC158986.1-201ENSMUST00000228391 3455 ntBASIC6.68□□□□□ -1.34
Sox1P53783 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox1P53783 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox1P53783 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC6.68□□□□□ -1.34
Sox1P53783 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Sox1P53783 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox1P53783 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.67□□□□□ -1.34
Sox1P53783 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Sox1P53783 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Sox1P53783 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Sox1P53783 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox1P53783 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox1P53783 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Sox1P53783 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox1P53783 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox1P53783 Gm45872-201ENSMUST00000209804 1584 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Sox1P53783 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox1P53783 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox1P53783 Igkv13-87-201ENSMUST00000114214 286 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Gm11488-201ENSMUST00000117277 863 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Gm14794-201ENSMUST00000118181 192 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Gm11904-201ENSMUST00000120562 248 ntBASIC6.67□□□□□ -1.34
Sox1P53783 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.67□□□□□ -1.34
Sox1P53783 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.67□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms