Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Rfx3P48381 Gm26078-201ENSMUST00000104067 128 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 Gm11970-201ENSMUST00000116105 320 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 Gm12245-201ENSMUST00000117266 357 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC4.82□□□□□ -1.64
Rfx3P48381 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Rfx3P48381 Gm5381-201ENSMUST00000117975 1250 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 Gm14985-201ENSMUST00000118693 786 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 Gm12936-201ENSMUST00000121439 301 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 Gm23883-201ENSMUST00000122686 290 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Rfx3P48381 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC4.82□□□□□ -1.64
Rfx3P48381 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.82□□□□□ -1.64
Rfx3P48381 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC4.82□□□□□ -1.64
Rfx3P48381 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Rfx3P48381 Olfr331-202ENSMUST00000170501 957 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 Gm22411-201ENSMUST00000175462 126 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 Gm22002-201ENSMUST00000175622 125 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 Gm2877-201ENSMUST00000178248 1204 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 Gm8324-201ENSMUST00000178911 1204 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Rfx3P48381 Gm29161-201ENSMUST00000188250 699 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 Ighv1-44-201ENSMUST00000195597 352 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 Gm20940-201ENSMUST00000197308 360 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 Gm42428-201ENSMUST00000198677 302 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 Gm43215-201ENSMUST00000199108 252 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 Gm44221-201ENSMUST00000203552 388 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 Clec2j-202ENSMUST00000203658 606 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC4.82□□□□□ -1.64
Rfx3P48381 Gm45750-201ENSMUST00000211966 354 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 AC134860.4-201ENSMUST00000223592 978 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Rfx3P48381 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Rfx3P48381 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Rfx3P48381 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Rfx3P48381 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
Rfx3P48381 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Rfx3P48381 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Rfx3P48381 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Rfx3P48381 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Rfx3P48381 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.82□□□□□ -1.64
Rfx3P48381 Gm37890-201ENSMUST00000195610 3992 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rfx3P48381 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rfx3P48381 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Rfx3P48381 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rfx3P48381 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Rfx3P48381 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC4.81□□□□□ -1.64
Rfx3P48381 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rfx3P48381 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rfx3P48381 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Rfx3P48381 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Rfx3P48381 Gm15073-201ENSMUST00000117432 634 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Gm14539-201ENSMUST00000117527 174 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Gm14874-201ENSMUST00000118995 438 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Gm12482-201ENSMUST00000120435 630 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Gm14603-201ENSMUST00000121275 448 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Rfx3P48381 Gm26372-201ENSMUST00000157831 236 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Gm20519-201ENSMUST00000173684 359 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Rfx3P48381 Gm8941-201ENSMUST00000181451 899 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Gm27409-201ENSMUST00000184727 80 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Gm28975-201ENSMUST00000186412 686 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Gm28186-201ENSMUST00000187447 679 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Rfx3P48381 Gm43516-201ENSMUST00000196891 322 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Rfx3P48381 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.81□□□□□ -1.64
Rfx3P48381 Gm43456-201ENSMUST00000202519 457 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC4.81□□□□□ -1.64
Rfx3P48381 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
Rfx3P48381 Gm18599-201ENSMUST00000206729 1125 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rfx3P48381 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Rfx3P48381 LOC665443-201ENSMUST00000212284 796 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 AC159246.1-201ENSMUST00000214478 249 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC4.81□□□□□ -1.64
Rfx3P48381 AC156802.1-201ENSMUST00000223623 579 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 AC174797.2-203ENSMUST00000224017 716 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 AC161609.1-201ENSMUST00000225878 474 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 AC154806.3-201ENSMUST00000227376 439 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rfx3P48381 Gm16335-201ENSMUST00000077495 309 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rfx3P48381 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.81□□□□□ -1.64
Rfx3P48381 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rfx3P48381 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Rfx3P48381 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Rfx3P48381 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
Rfx3P48381 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Rfx3P48381 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rfx3P48381 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Rfx3P48381 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Rfx3P48381 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rfx3P48381 AC159308.1-201ENSMUST00000216615 1351 ntBASIC4.8□□□□□ -1.64
Rfx3P48381 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rfx3P48381 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms