Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Col2a1P28481 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col2a1P28481 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col2a1P28481 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col2a1P28481 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6□□□□□ -1.45
Col2a1P28481 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6□□□□□ -1.45
Col2a1P28481 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col2a1P28481 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
Col2a1P28481 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Col2a1P28481 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col2a1P28481 Gm15828-201ENSMUST00000119911 522 ntBASIC6□□□□□ -1.45
Col2a1P28481 Gm13367-201ENSMUST00000119955 796 ntBASIC6□□□□□ -1.45
Col2a1P28481 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC6□□□□□ -1.45
Col2a1P28481 Ear-ps9-201ENSMUST00000161963 460 ntBASIC6□□□□□ -1.45
Col2a1P28481 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Col2a1P28481 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC6□□□□□ -1.45
Col2a1P28481 Gm20523-201ENSMUST00000174340 1124 ntBASIC6□□□□□ -1.45
Col2a1P28481 Gm26950-201ENSMUST00000182734 498 ntBASIC6□□□□□ -1.45
Col2a1P28481 Gm37884-201ENSMUST00000191857 818 ntBASIC6□□□□□ -1.45
Col2a1P28481 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC6□□□□□ -1.45
Col2a1P28481 Gm2645-201ENSMUST00000223516 547 ntBASIC6□□□□□ -1.45
Col2a1P28481 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col2a1P28481 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col2a1P28481 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col2a1P28481 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
Col2a1P28481 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col2a1P28481 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col2a1P28481 Gm43283-201ENSMUST00000199138 2548 ntBASIC6□□□□□ -1.45
Col2a1P28481 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col2a1P28481 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col2a1P28481 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col2a1P28481 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.99□□□□□ -1.45
Col2a1P28481 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Col2a1P28481 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col2a1P28481 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.99□□□□□ -1.45
Col2a1P28481 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm44434-201ENSMUST00000203918 3745 ntBASIC5.99□□□□□ -1.45
Col2a1P28481 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.99□□□□□ -1.45
Col2a1P28481 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col2a1P28481 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm3267-201ENSMUST00000118671 473 ntBASIC5.99□□□□□ -1.45
Col2a1P28481 Gm22870-201ENSMUST00000157501 112 ntBASIC5.99□□□□□ -1.45
Col2a1P28481 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm25534-201ENSMUST00000175365 125 ntBASIC5.99□□□□□ -1.45
Col2a1P28481 Gm5244-202ENSMUST00000189517 743 ntBASIC5.99□□□□□ -1.45
Col2a1P28481 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.99□□□□□ -1.45
Col2a1P28481 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.99□□□□□ -1.45
Col2a1P28481 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.99□□□□□ -1.45
Col2a1P28481 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC5.99□□□□□ -1.45
Col2a1P28481 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.99□□□□□ -1.45
Col2a1P28481 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col2a1P28481 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col2a1P28481 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Col2a1P28481 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Col2a1P28481 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col2a1P28481 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col2a1P28481 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm37925-201ENSMUST00000195352 4255 ntBASIC5.99□□□□□ -1.45
Col2a1P28481 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.99□□□□□ -1.45
Col2a1P28481 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.99□□□□□ -1.45
Col2a1P28481 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC5.99□□□□□ -1.45
Col2a1P28481 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.99□□□□□ -1.45
Col2a1P28481 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col2a1P28481 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col2a1P28481 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.98□□□□□ -1.45
Col2a1P28481 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.98□□□□□ -1.45
Col2a1P28481 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col2a1P28481 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.98□□□□□ -1.45
Col2a1P28481 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col2a1P28481 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.98□□□□□ -1.45
Col2a1P28481 Gm8202-201ENSMUST00000117682 310 ntBASIC5.98□□□□□ -1.45
Col2a1P28481 Gm15357-201ENSMUST00000119160 285 ntBASIC5.98□□□□□ -1.45
Col2a1P28481 Gm12444-201ENSMUST00000121512 877 ntBASIC5.98□□□□□ -1.45
Col2a1P28481 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col2a1P28481 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Col2a1P28481 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col2a1P28481 Gm6673-201ENSMUST00000166114 700 ntBASIC5.98□□□□□ -1.45
Col2a1P28481 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.98□□□□□ -1.45
Col2a1P28481 Mir6975-201ENSMUST00000184879 61 ntBASIC5.98□□□□□ -1.45
Col2a1P28481 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC5.98□□□□□ -1.45
Col2a1P28481 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC5.98□□□□□ -1.45
Col2a1P28481 Gm9134-201ENSMUST00000193186 551 ntBASIC5.98□□□□□ -1.45
Col2a1P28481 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col2a1P28481 Gm2147-201ENSMUST00000193588 639 ntBASIC5.98□□□□□ -1.45
Col2a1P28481 AC096628.1-201ENSMUST00000226060 641 ntBASIC5.98□□□□□ -1.45
Col2a1P28481 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms