Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Hoxd3P09027 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Hoxd3P09027 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
Hoxd3P09027 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
Hoxd3P09027 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Hoxd3P09027 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Hoxd3P09027 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Klf10-202ENSMUST00000226363 2917 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm25916-201ENSMUST00000104263 131 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm14292-201ENSMUST00000118761 456 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm12448-201ENSMUST00000118852 655 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm7421-201ENSMUST00000119298 639 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm11881-201ENSMUST00000119408 572 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm13525-201ENSMUST00000120607 478 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm7365-201ENSMUST00000120877 639 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm24103-201ENSMUST00000174930 77 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm23864-201ENSMUST00000177607 107 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm22851-201ENSMUST00000178741 94 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm25942-201ENSMUST00000180080 110 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm27676-201ENSMUST00000183669 61 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm27161-201ENSMUST00000183960 562 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Npn2-202ENSMUST00000189275 235 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm45150-201ENSMUST00000206051 467 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.74□□□□□ -1.49
Hoxd3P09027 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm36501-201ENSMUST00000221857 745 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 AC166341.3-201ENSMUST00000221861 114 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 AC117949.1-201ENSMUST00000225547 419 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 AC110176.1-201ENSMUST00000226219 504 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 AC154467.1-201ENSMUST00000227527 449 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Snord38a-201ENSMUST00000083746 71 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC5.74□□□□□ -1.49
Hoxd3P09027 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hoxd3P09027 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hoxd3P09027 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hoxd3P09027 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hoxd3P09027 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hoxd3P09027 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hoxd3P09027 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm10623-201ENSMUST00000209081 2639 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm37460-201ENSMUST00000191796 2249 ntBASIC5.74□□□□□ -1.49
Hoxd3P09027 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC5.74□□□□□ -1.49
Hoxd3P09027 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hoxd3P09027 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hoxd3P09027 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hoxd3P09027 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 CR974429.2-201ENSMUST00000221883 1696 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 AC154597.1-201ENSMUST00000224095 2713 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Hoxd3P09027 CT025619.3-201ENSMUST00000216299 3267 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm15229-201ENSMUST00000146636 1398 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Mir450-2-201ENSMUST00000102444 69 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm23431-201ENSMUST00000104006 107 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm13733-201ENSMUST00000117290 535 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm13224-201ENSMUST00000119586 94 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm14655-201ENSMUST00000120124 578 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm5135-201ENSMUST00000121100 573 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm14736-201ENSMUST00000121470 336 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms