Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm12358-201ENSMUST00000121842 520 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm14349-201ENSMUST00000137155 902 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm25559-201ENSMUST00000157182 74 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm24057-201ENSMUST00000158616 302 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm8338-201ENSMUST00000163928 363 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm15257-201ENSMUST00000177680 883 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm15252-201ENSMUST00000177750 883 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm15260-201ENSMUST00000179402 883 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Mir496b-201ENSMUST00000184935 113 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm4545-201ENSMUST00000190797 603 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm7341-201ENSMUST00000192183 926 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm17824-201ENSMUST00000197690 805 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm9245-201ENSMUST00000200528 983 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm42883-201ENSMUST00000202594 222 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm44971-201ENSMUST00000206192 337 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 AC104832.1-201ENSMUST00000222938 550 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC6.74□□□□□ -1.33
Trim42Q9D2H5 Gm45872-201ENSMUST00000209804 1584 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.74□□□□□ -1.33
Trim42Q9D2H5 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm14769-201ENSMUST00000118590 432 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm12944-201ENSMUST00000119262 463 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm14852-201ENSMUST00000120065 647 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm14053-201ENSMUST00000121662 470 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm13724-201ENSMUST00000122395 1155 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm13368-201ENSMUST00000122443 430 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm24939-201ENSMUST00000158325 137 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm22361-201ENSMUST00000158435 176 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm23028-201ENSMUST00000158773 265 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm18522-201ENSMUST00000173947 650 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Mir6357-201ENSMUST00000184246 104 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm28016-201ENSMUST00000184594 196 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm8101-201ENSMUST00000192796 478 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm5660-201ENSMUST00000197453 1149 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm44385-201ENSMUST00000198781 81 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm36448-201ENSMUST00000199916 438 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 AC161520.1-201ENSMUST00000210954 939 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm7151-201ENSMUST00000211511 954 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm7570-201ENSMUST00000215246 698 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Olfr936-202ENSMUST00000216912 937 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 CT030030.1-201ENSMUST00000218809 152 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 AC164424.1-201ENSMUST00000221690 170 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 AC153662.1-201ENSMUST00000222220 270 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 AC173481.1-201ENSMUST00000223351 270 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Trim42Q9D2H5 Gm22364-201ENSMUST00000083097 98 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms