Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
Trim35Q8C006 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
Trim35Q8C006 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim35Q8C006 Zfp354a-203ENSMUST00000109119 2078 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Trim35Q8C006 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm42513-201ENSMUST00000197831 2119 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim35Q8C006 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim35Q8C006 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Trim35Q8C006 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
Trim35Q8C006 AC151734.1-201ENSMUST00000227023 1740 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim35Q8C006 Slco4a1-201ENSMUST00000038225 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim35Q8C006 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm12647-201ENSMUST00000118977 265 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm13198-201ENSMUST00000119322 826 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm9670-201ENSMUST00000121201 540 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm13645-201ENSMUST00000145163 699 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim35Q8C006 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm22290-201ENSMUST00000177655 107 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm22583-201ENSMUST00000178031 107 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm5329-201ENSMUST00000186898 463 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim35Q8C006 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm29524-201ENSMUST00000190819 699 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm37904-201ENSMUST00000195591 312 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm43145-201ENSMUST00000198963 628 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm30781-201ENSMUST00000204743 216 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm45295-201ENSMUST00000210393 1046 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm8838-201ENSMUST00000212978 541 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm18030-201ENSMUST00000222163 731 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 AC154861.1-201ENSMUST00000223767 800 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Hist1h1t-201ENSMUST00000041052 912 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Trim35Q8C006 Olfr543-201ENSMUST00000061482 1130 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm5619-201ENSMUST00000071172 760 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm26263-201ENSMUST00000083281 164 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Olfr559-201ENSMUST00000084816 1022 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Trim35Q8C006 Kctd21-201ENSMUST00000054107 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC8.47□□□□□ -1.05
Trim35Q8C006 Ptchd1-201ENSMUST00000038665 2768 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim35Q8C006 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim35Q8C006 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim35Q8C006 Mef2c-218ENSMUST00000198199 2589 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim35Q8C006 Ect2l-205ENSMUST00000209178 2586 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm232-201ENSMUST00000216549 2559 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Rbm43-202ENSMUST00000102768 2106 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Trim35Q8C006 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim35Q8C006 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim35Q8C006 Mgat4e-201ENSMUST00000052911 1360 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm43766-201ENSMUST00000200590 5417 ntBASIC8.47□□□□□ -1.05
Trim35Q8C006 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim35Q8C006 Gm8980-201ENSMUST00000140232 2197 ntBASIC8.46□□□□□ -1.05
Trim35Q8C006 Gm15425-201ENSMUST00000119013 2711 ntBASIC8.46□□□□□ -1.05
Trim35Q8C006 AC164437.4-204ENSMUST00000227169 4024 ntBASIC8.46□□□□□ -1.05
Trim35Q8C006 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.05
Trim35Q8C006 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim35Q8C006 Grip1-207ENSMUST00000130387 2780 ntTSL 5 BASIC8.46□□□□□ -1.05
Trim35Q8C006 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim35Q8C006 Dnaic1-201ENSMUST00000102963 2510 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim35Q8C006 Pou2f1-201ENSMUST00000027850 2258 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Trim35Q8C006 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Trim35Q8C006 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Trim35Q8C006 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim35Q8C006 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim35Q8C006 Olfr1110-202ENSMUST00000152758 3159 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
Trim35Q8C006 Brip1os-202ENSMUST00000143819 2604 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Trim35Q8C006 n-R5s102-201ENSMUST00000101990 119 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Igkv2-112-202ENSMUST00000103319 358 ntAPPRIS ALT2 BASIC8.46□□□□□ -1.06
Trim35Q8C006 Snord98-201ENSMUST00000116819 65 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Gm14823-201ENSMUST00000117698 238 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Gm13469-201ENSMUST00000118231 350 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Gm16235-201ENSMUST00000146132 342 ntTSL 5 BASIC8.46□□□□□ -1.06
Trim35Q8C006 Gm25393-201ENSMUST00000157336 285 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Gm23537-201ENSMUST00000157536 330 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Gm16494-201ENSMUST00000165525 261 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Trim35Q8C006 Gm8696-201ENSMUST00000174777 385 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 n-R5s101-201ENSMUST00000177910 119 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 n-R5s114-201ENSMUST00000178297 119 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 n-R5s119-201ENSMUST00000178861 119 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 n-R5s127-201ENSMUST00000179185 119 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 n-R5s129-201ENSMUST00000180122 119 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 n-R5s131-201ENSMUST00000180280 119 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC8.46□□□□□ -1.06
Trim35Q8C006 Gm37155-201ENSMUST00000192152 406 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Gm37128-201ENSMUST00000192599 232 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Olfr1398-ps1-201ENSMUST00000193866 929 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Ighv1-17-201ENSMUST00000194435 350 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Gm42760-201ENSMUST00000199814 311 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Gm18325-201ENSMUST00000203228 835 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Gm5324-201ENSMUST00000208115 476 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Gm31166-201ENSMUST00000209326 288 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 119.9 ms