Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
Clcn1Q64347 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clcn1Q64347 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Clcn1Q64347 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC8.61□□□□□ -1.03
Clcn1Q64347 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Clcn1Q64347 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Clcn1Q64347 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clcn1Q64347 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clcn1Q64347 Gm8700-201ENSMUST00000222187 3054 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Clcn1Q64347 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clcn1Q64347 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clcn1Q64347 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Clcn1Q64347 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Clcn1Q64347 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clcn1Q64347 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clcn1Q64347 AC163660.3-201ENSMUST00000224253 1563 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm5512-202ENSMUST00000220222 1522 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 AC139750.1-201ENSMUST00000223962 1300 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 AC139941.2-201ENSMUST00000221565 1824 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm23748-201ENSMUST00000104227 131 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm24683-201ENSMUST00000104840 88 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 M6pr-ps-201ENSMUST00000120481 830 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm9597-201ENSMUST00000171913 602 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm19932-201ENSMUST00000177033 313 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm20620-201ENSMUST00000177528 168 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm27313-201ENSMUST00000183500 142 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 Scgb2b33-201ENSMUST00000187413 334 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm43370-201ENSMUST00000196437 284 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm44911-201ENSMUST00000208436 1062 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm18586-201ENSMUST00000217265 518 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC8.6□□□□□ -1.03
Clcn1Q64347 AC156790.1-201ENSMUST00000226572 559 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 CT573086.3-201ENSMUST00000228762 594 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC8.6□□□□□ -1.03
Clcn1Q64347 CT009480.2-201ENSMUST00000225152 3369 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clcn1Q64347 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
Clcn1Q64347 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC8.6□□□□□ -1.03
Clcn1Q64347 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms