Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Msh6P54276 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.83□□□□□ -1.32
Msh6P54276 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Msh6P54276 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Msh6P54276 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Msh6P54276 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.83□□□□□ -1.32
Msh6P54276 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.83□□□□□ -1.32
Msh6P54276 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Msh6P54276 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
Msh6P54276 Gm22266-201ENSMUST00000104011 138 ntBASIC6.82□□□□□ -1.32
Msh6P54276 Gm7206-201ENSMUST00000117730 508 ntBASIC6.82□□□□□ -1.32
Msh6P54276 Gm6620-201ENSMUST00000120113 715 ntBASIC6.82□□□□□ -1.32
Msh6P54276 Gm25179-201ENSMUST00000122632 128 ntBASIC6.82□□□□□ -1.32
Msh6P54276 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Msh6P54276 Gm25865-201ENSMUST00000158247 104 ntBASIC6.82□□□□□ -1.32
Msh6P54276 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh6P54276 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh6P54276 V1rg10-201ENSMUST00000183378 937 ntBASIC6.82□□□□□ -1.32
Msh6P54276 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
Msh6P54276 AC131178.1-201ENSMUST00000228649 492 ntBASIC6.82□□□□□ -1.32
Msh6P54276 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh6P54276 Gm23626-201ENSMUST00000082458 133 ntBASIC6.82□□□□□ -1.32
Msh6P54276 Gm23508-201ENSMUST00000083079 72 ntBASIC6.82□□□□□ -1.32
Msh6P54276 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Msh6P54276 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Msh6P54276 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.82□□□□□ -1.32
Msh6P54276 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Msh6P54276 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh6P54276 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh6P54276 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.82□□□□□ -1.32
Msh6P54276 Gm45819-201ENSMUST00000210940 1751 ntBASIC6.82□□□□□ -1.32
Msh6P54276 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh6P54276 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh6P54276 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Msh6P54276 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC6.82□□□□□ -1.32
Msh6P54276 AC117769.3-201ENSMUST00000225814 1664 ntBASIC6.82□□□□□ -1.32
Msh6P54276 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh6P54276 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Msh6P54276 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh6P54276 Gm25537-201ENSMUST00000103851 109 ntBASIC6.82□□□□□ -1.32
Msh6P54276 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
Msh6P54276 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC6.82□□□□□ -1.32
Msh6P54276 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.82□□□□□ -1.32
Msh6P54276 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC6.82□□□□□ -1.32
Msh6P54276 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC6.82□□□□□ -1.32
Msh6P54276 Gm42542-201ENSMUST00000197978 268 ntBASIC6.82□□□□□ -1.32
Msh6P54276 Gm42640-201ENSMUST00000199792 1195 ntBASIC6.82□□□□□ -1.32
Msh6P54276 AC153553.1-201ENSMUST00000218257 684 ntBASIC6.82□□□□□ -1.32
Msh6P54276 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC6.82□□□□□ -1.32
Msh6P54276 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Msh6P54276 CT030238.1-201ENSMUST00000228393 442 ntBASIC6.82□□□□□ -1.32
Msh6P54276 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Msh6P54276 n-R5s62-201ENSMUST00000082780 96 ntBASIC6.82□□□□□ -1.32
Msh6P54276 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Msh6P54276 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
Msh6P54276 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Msh6P54276 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Msh6P54276 Gm19035-201ENSMUST00000193299 1742 ntBASIC6.81□□□□□ -1.32
Msh6P54276 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Msh6P54276 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC6.81□□□□□ -1.32
Msh6P54276 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Msh6P54276 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Msh6P54276 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Msh6P54276 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Msh6P54276 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.81□□□□□ -1.32
Msh6P54276 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Msh6P54276 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Msh6P54276 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC6.81□□□□□ -1.32
Msh6P54276 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Msh6P54276 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
Msh6P54276 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Msh6P54276 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Msh6P54276 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Msh6P54276 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Msh6P54276 Gm3267-201ENSMUST00000118671 473 ntBASIC6.81□□□□□ -1.32
Msh6P54276 Gm12813-201ENSMUST00000119615 902 ntBASIC6.81□□□□□ -1.32
Msh6P54276 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Msh6P54276 Gm22277-201ENSMUST00000157204 277 ntBASIC6.81□□□□□ -1.32
Msh6P54276 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Msh6P54276 Gm37444-201ENSMUST00000193605 439 ntBASIC6.81□□□□□ -1.32
Msh6P54276 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Msh6P54276 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC6.81□□□□□ -1.32
Msh6P54276 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC6.81□□□□□ -1.32
Msh6P54276 Gm46369-201ENSMUST00000221577 401 ntBASIC6.81□□□□□ -1.32
Msh6P54276 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Msh6P54276 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Msh6P54276 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Msh6P54276 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Msh6P54276 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Msh6P54276 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Msh6P54276 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Msh6P54276 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Msh6P54276 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Msh6P54276 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Msh6P54276 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Msh6P54276 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
Msh6P54276 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Msh6P54276 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Msh6P54276 Gm37205-201ENSMUST00000194820 2736 ntBASIC6.8□□□□□ -1.32
Msh6P54276 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms