Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.15□□□□□ -1.43
Msx2Q03358 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Msx2Q03358 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Msx2Q03358 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Msx2Q03358 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.15□□□□□ -1.43
Msx2Q03358 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Msx2Q03358 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Msx2Q03358 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Msx2Q03358 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.15□□□□□ -1.43
Msx2Q03358 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Msx2Q03358 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Msx2Q03358 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Msx2Q03358 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Msx2Q03358 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.15□□□□□ -1.43
Msx2Q03358 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Msx2Q03358 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.15□□□□□ -1.43
Msx2Q03358 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Msx2Q03358 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Msx2Q03358 Gm42520-201ENSMUST00000199642 1502 ntBASIC6.15□□□□□ -1.43
Msx2Q03358 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
Msx2Q03358 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Msx2Q03358 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Msx2Q03358 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Msx2Q03358 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm25757-201ENSMUST00000103986 123 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Gm23133-201ENSMUST00000104255 135 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Msx2Q03358 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm12520-201ENSMUST00000117493 316 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Gm13803-201ENSMUST00000117547 489 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Gm13877-201ENSMUST00000120614 417 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Gm13865-201ENSMUST00000120957 865 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Gm11965-201ENSMUST00000122017 277 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm23205-201ENSMUST00000158671 103 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.14□□□□□ -1.43
Msx2Q03358 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Mir7029-201ENSMUST00000184777 61 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm37219-201ENSMUST00000192036 926 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Ighv1-3-201ENSMUST00000192764 302 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Gm18952-201ENSMUST00000194471 846 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Gm43396-201ENSMUST00000197506 706 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.14□□□□□ -1.43
Msx2Q03358 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Msx2Q03358 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC6.14□□□□□ -1.43
Msx2Q03358 AC160114.1-201ENSMUST00000221930 365 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 AC117202.2-201ENSMUST00000226491 1101 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC6.14□□□□□ -1.43
Msx2Q03358 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Msx2Q03358 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Msx2Q03358 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.14□□□□□ -1.43
Msx2Q03358 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm7690-201ENSMUST00000190885 1399 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Msx2Q03358 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.14□□□□□ -1.43
Msx2Q03358 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Msx2Q03358 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Msx2Q03358 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms