Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col1a1P11087 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col1a1P11087 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col1a1P11087 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col1a1P11087 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.24□□□□□ -1.41
Col1a1P11087 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col1a1P11087 Gm37077-201ENSMUST00000195723 3691 ntBASIC6.24□□□□□ -1.41
Col1a1P11087 Gm43490-201ENSMUST00000197593 2652 ntBASIC6.24□□□□□ -1.41
Col1a1P11087 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.24□□□□□ -1.41
Col1a1P11087 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col1a1P11087 Gm19035-201ENSMUST00000193299 1742 ntBASIC6.24□□□□□ -1.41
Col1a1P11087 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col1a1P11087 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Col1a1P11087 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Col1a1P11087 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC6.23□□□□□ -1.41
Col1a1P11087 Gm11679-201ENSMUST00000121830 779 ntBASIC6.23□□□□□ -1.41
Col1a1P11087 Gm24186-201ENSMUST00000157983 127 ntBASIC6.23□□□□□ -1.41
Col1a1P11087 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col1a1P11087 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col1a1P11087 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col1a1P11087 Gm8941-201ENSMUST00000181451 899 ntBASIC6.23□□□□□ -1.41
Col1a1P11087 Gm42459-201ENSMUST00000199679 742 ntBASIC6.23□□□□□ -1.41
Col1a1P11087 Gm9655-201ENSMUST00000211321 1284 ntBASIC6.23□□□□□ -1.41
Col1a1P11087 CR974592.1-201ENSMUST00000220422 574 ntBASIC6.23□□□□□ -1.41
Col1a1P11087 Gm17915-201ENSMUST00000222077 548 ntBASIC6.23□□□□□ -1.41
Col1a1P11087 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Col1a1P11087 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
Col1a1P11087 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col1a1P11087 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Col1a1P11087 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Col1a1P11087 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col1a1P11087 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col1a1P11087 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col1a1P11087 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.23□□□□□ -1.41
Col1a1P11087 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col1a1P11087 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col1a1P11087 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.23□□□□□ -1.41
Col1a1P11087 Gm45324-201ENSMUST00000211193 5638 ntBASIC6.23□□□□□ -1.41
Col1a1P11087 Gm10652-201ENSMUST00000199790 2622 ntBASIC6.23□□□□□ -1.41
Col1a1P11087 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col1a1P11087 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Col1a1P11087 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col1a1P11087 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col1a1P11087 Gm44801-201ENSMUST00000207644 2060 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 Gm7657-201ENSMUST00000118851 666 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC6.22□□□□□ -1.41
Col1a1P11087 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC6.22□□□□□ -1.41
Col1a1P11087 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC6.22□□□□□ -1.41
Col1a1P11087 Gm43309-201ENSMUST00000200837 458 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col1a1P11087 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC6.22□□□□□ -1.41
Col1a1P11087 AC154484.2-201ENSMUST00000228359 818 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
Col1a1P11087 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col1a1P11087 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Col1a1P11087 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col1a1P11087 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col1a1P11087 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col1a1P11087 Gm37485-201ENSMUST00000192326 2953 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col1a1P11087 Gm25096-201ENSMUST00000104043 129 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 Gm15168-201ENSMUST00000121057 316 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 Gm12466-201ENSMUST00000121199 620 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col1a1P11087 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col1a1P11087 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col1a1P11087 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC6.22□□□□□ -1.41
Col1a1P11087 Gm20954-201ENSMUST00000189078 644 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 Gm4321-201ENSMUST00000200520 442 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 Gm43418-201ENSMUST00000201334 428 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 Gm45610-201ENSMUST00000209227 784 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 Gm45870-201ENSMUST00000211269 601 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC6.22□□□□□ -1.41
Col1a1P11087 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC6.22□□□□□ -1.41
Col1a1P11087 AC112142.1-206ENSMUST00000228136 982 ntBASIC6.22□□□□□ -1.41
Col1a1P11087 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col1a1P11087 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col1a1P11087 AC093022.3-201ENSMUST00000226569 1926 ntBASIC6.21□□□□□ -1.42
Col1a1P11087 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Col1a1P11087 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col1a1P11087 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.21□□□□□ -1.42
Col1a1P11087 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.21□□□□□ -1.42
Col1a1P11087 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col1a1P11087 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col1a1P11087 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Col1a1P11087 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col1a1P11087 Gm15791-201ENSMUST00000120365 319 ntBASIC6.21□□□□□ -1.42
Col1a1P11087 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col1a1P11087 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col1a1P11087 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC6.21□□□□□ -1.42
Col1a1P11087 Gm26098-201ENSMUST00000157247 288 ntBASIC6.21□□□□□ -1.42
Col1a1P11087 Gm28468-201ENSMUST00000188536 615 ntBASIC6.21□□□□□ -1.42
Col1a1P11087 Gm37710-201ENSMUST00000193501 1274 ntBASIC6.21□□□□□ -1.42
Col1a1P11087 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms