Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm45874-201ENSMUST00000212423 346 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm19116-201ENSMUST00000218592 642 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm25401-201ENSMUST00000082975 106 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Mir425-201ENSMUST00000083645 85 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm45786-201ENSMUST00000213021 2278 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm23748-201ENSMUST00000104227 131 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm16073-201ENSMUST00000116032 517 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm5601-201ENSMUST00000118909 972 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm11943-201ENSMUST00000119473 327 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm15311-201ENSMUST00000119682 282 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm15305-201ENSMUST00000120354 288 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm14613-201ENSMUST00000122239 752 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm22523-201ENSMUST00000158696 100 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm9587-201ENSMUST00000172449 454 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm23968-201ENSMUST00000175047 125 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Mir8118-201ENSMUST00000183962 129 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm29464-201ENSMUST00000187692 513 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm20932-201ENSMUST00000189115 694 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm29160-201ENSMUST00000190094 699 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm9504-201ENSMUST00000196322 468 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm43929-201ENSMUST00000203025 409 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm29920-201ENSMUST00000206876 754 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm45899-201ENSMUST00000212196 1276 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 AC131654.1-201ENSMUST00000219675 745 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 AC133101.1-201ENSMUST00000226939 1199 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm23628-201ENSMUST00000082464 173 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm25587-201ENSMUST00000082498 166 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm18186-201ENSMUST00000192239 1580 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm42639-201ENSMUST00000197061 1871 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Gm43181-201ENSMUST00000197001 2072 ntBASIC7.53□□□□□ -1.2
Trim47Q8C0E3 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC7.53□□□□□ -1.2
Trim47Q8C0E3 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC7.52□□□□□ -1.2
Trim47Q8C0E3 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
Trim47Q8C0E3 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Trim47Q8C0E3 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm45073-201ENSMUST00000207688 4247 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm21846-201ENSMUST00000179257 3073 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms