Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox18P43680 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
Sox18P43680 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox18P43680 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox18P43680 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Sox18P43680 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Sox18P43680 Gm40020-201ENSMUST00000215677 1635 ntBASIC7.01□□□□□ -1.29
Sox18P43680 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Sox18P43680 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox18P43680 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC7.01□□□□□ -1.29
Sox18P43680 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Sox18P43680 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Sox18P43680 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Sox18P43680 AC115760.1-201ENSMUST00000225160 1327 ntBASIC7.01□□□□□ -1.29
Sox18P43680 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox18P43680 CT009711.1-201ENSMUST00000223992 3040 ntBASIC7.01□□□□□ -1.29
Sox18P43680 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Sox18P43680 Gm7134-201ENSMUST00000122296 2406 ntBASIC7□□□□□ -1.29
Sox18P43680 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC7□□□□□ -1.29
Sox18P43680 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC7□□□□□ -1.29
Sox18P43680 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC7□□□□□ -1.29
Sox18P43680 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC7□□□□□ -1.29
Sox18P43680 Gm44164-201ENSMUST00000203605 2561 ntBASIC7□□□□□ -1.29
Sox18P43680 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Gm2178-201ENSMUST00000104927 357 ntBASIC7□□□□□ -1.29
Sox18P43680 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7□□□□□ -1.29
Sox18P43680 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC7□□□□□ -1.29
Sox18P43680 Gm11474-201ENSMUST00000120814 277 ntBASIC7□□□□□ -1.29
Sox18P43680 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC7□□□□□ -1.29
Sox18P43680 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC7□□□□□ -1.29
Sox18P43680 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Gm15900-201ENSMUST00000161584 342 ntBASIC7□□□□□ -1.29
Sox18P43680 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Gm9285-201ENSMUST00000177691 697 ntBASIC7□□□□□ -1.29
Sox18P43680 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC7□□□□□ -1.29
Sox18P43680 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC7□□□□□ -1.29
Sox18P43680 Gm25314-201ENSMUST00000178810 79 ntBASIC7□□□□□ -1.29
Sox18P43680 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC7□□□□□ -1.29
Sox18P43680 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC7□□□□□ -1.29
Sox18P43680 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC7□□□□□ -1.29
Sox18P43680 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC7□□□□□ -1.29
Sox18P43680 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC7□□□□□ -1.29
Sox18P43680 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC7□□□□□ -1.29
Sox18P43680 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Rps12l1-201ENSMUST00000183090 399 ntBASIC7□□□□□ -1.29
Sox18P43680 Mir7235-201ENSMUST00000183796 56 ntBASIC7□□□□□ -1.29
Sox18P43680 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Gm7858-201ENSMUST00000190177 622 ntBASIC7□□□□□ -1.29
Sox18P43680 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC7□□□□□ -1.29
Sox18P43680 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Gm7369-201ENSMUST00000192738 936 ntBASIC7□□□□□ -1.29
Sox18P43680 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC7□□□□□ -1.29
Sox18P43680 Gm43355-201ENSMUST00000196541 346 ntBASIC7□□□□□ -1.29
Sox18P43680 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC7□□□□□ -1.29
Sox18P43680 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC7□□□□□ -1.29
Sox18P43680 Gm44163-201ENSMUST00000205140 475 ntBASIC7□□□□□ -1.29
Sox18P43680 Gm19880-201ENSMUST00000207731 318 ntBASIC7□□□□□ -1.29
Sox18P43680 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC7□□□□□ -1.29
Sox18P43680 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Gm45438-201ENSMUST00000210242 564 ntBASIC7□□□□□ -1.29
Sox18P43680 Gm8575-201ENSMUST00000210262 521 ntBASIC7□□□□□ -1.29
Sox18P43680 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC7□□□□□ -1.29
Sox18P43680 Gm18696-201ENSMUST00000220103 274 ntBASIC7□□□□□ -1.29
Sox18P43680 Gm18247-201ENSMUST00000222937 601 ntBASIC7□□□□□ -1.29
Sox18P43680 CT009550.2-201ENSMUST00000228851 399 ntBASIC7□□□□□ -1.29
Sox18P43680 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC7□□□□□ -1.29
Sox18P43680 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Gm23734-201ENSMUST00000083753 109 ntBASIC7□□□□□ -1.29
Sox18P43680 Gm17165-201ENSMUST00000096155 493 ntBASIC7□□□□□ -1.29
Sox18P43680 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC7□□□□□ -1.29
Sox18P43680 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Sox18P43680 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Sox18P43680 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Sox18P43680 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC7□□□□□ -1.29
Sox18P43680 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Gm37510-201ENSMUST00000194151 4762 ntBASIC7□□□□□ -1.29
Sox18P43680 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Gm44669-201ENSMUST00000207774 1969 ntBASIC7□□□□□ -1.29
Sox18P43680 AC154347.1-201ENSMUST00000221358 3105 ntBASIC7□□□□□ -1.29
Sox18P43680 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7□□□□□ -1.29
Sox18P43680 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC7□□□□□ -1.29
Sox18P43680 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms