Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Hoxd3P09027 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm27660-201ENSMUST00000184028 208 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm21856-201ENSMUST00000187547 696 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm29470-201ENSMUST00000188007 696 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm28952-201ENSMUST00000189285 681 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm21735-201ENSMUST00000190360 696 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm2147-201ENSMUST00000193588 639 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm38300-201ENSMUST00000194245 1870 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm20926-201ENSMUST00000194457 696 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm19739-201ENSMUST00000195941 153 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm2505-201ENSMUST00000200413 825 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm44604-201ENSMUST00000205475 496 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm45402-201ENSMUST00000211796 223 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm18703-201ENSMUST00000215318 333 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Hoxd3P09027 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm2398-201ENSMUST00000218347 883 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.78□□□□□ -1.48
Hoxd3P09027 AC133598.2-201ENSMUST00000224302 624 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 AC161758.1-201ENSMUST00000226123 310 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 AC125087.1-201ENSMUST00000227552 514 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm26225-201ENSMUST00000082508 135 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm44777-201ENSMUST00000205941 4052 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
Hoxd3P09027 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm38315-201ENSMUST00000194286 2437 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Hoxd3P09027 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm14849-201ENSMUST00000122293 2846 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm11853-201ENSMUST00000119687 1384 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC5.78□□□□□ -1.48
Hoxd3P09027 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Hoxd3P09027 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 AC134596.1-201ENSMUST00000222016 1922 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 AC124421.1-201ENSMUST00000219114 4154 ntBASIC5.77□□□□□ -1.48
Hoxd3P09027 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC5.77□□□□□ -1.48
Hoxd3P09027 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
Hoxd3P09027 AC158115.1-201ENSMUST00000222830 3182 ntBASIC5.77□□□□□ -1.49
Hoxd3P09027 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm42989-201ENSMUST00000200646 2306 ntBASIC5.77□□□□□ -1.49
Hoxd3P09027 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hoxd3P09027 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hoxd3P09027 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC5.77□□□□□ -1.49
Hoxd3P09027 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Hoxd3P09027 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hoxd3P09027 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm38331-201ENSMUST00000195719 2671 ntBASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Hoxd3P09027 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Hoxd3P09027 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hoxd3P09027 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hoxd3P09027 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hoxd3P09027 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Hoxd3P09027 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Hoxd3P09027 Serpina3h-202ENSMUST00000116393 1226 ntBASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm16056-201ENSMUST00000119293 135 ntBASIC5.77□□□□□ -1.49
Hoxd3P09027 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm22025-201ENSMUST00000122734 302 ntBASIC5.77□□□□□ -1.49
Hoxd3P09027 Trav8-2-201ENSMUST00000130122 337 ntBASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm11962-201ENSMUST00000145746 255 ntBASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm23545-201ENSMUST00000158205 104 ntBASIC5.77□□□□□ -1.49
Hoxd3P09027 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Hoxd3P09027 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm28146-201ENSMUST00000185517 701 ntBASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm28574-201ENSMUST00000185757 699 ntBASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm4854-201ENSMUST00000185902 574 ntBASIC5.77□□□□□ -1.49
Hoxd3P09027 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm28397-201ENSMUST00000187970 699 ntBASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC5.77□□□□□ -1.49
Hoxd3P09027 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Hoxd3P09027 Gm29366-201ENSMUST00000190481 699 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 118.9 ms