Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm14870-201ENSMUST00000118414 156 ntBASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm13131-201ENSMUST00000122228 321 ntBASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm24395-201ENSMUST00000158139 125 ntBASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm23352-201ENSMUST00000158428 64 ntBASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm28343-201ENSMUST00000185386 112 ntBASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm20871-201ENSMUST00000191322 931 ntBASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm37380-201ENSMUST00000193752 397 ntBASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm34015-201ENSMUST00000194908 451 ntBASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm38109-201ENSMUST00000195386 181 ntBASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC7.04□□□□□ -1.28
Clp1Q99LI9 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm26130-201ENSMUST00000083171 138 ntBASIC7.04□□□□□ -1.28
Clp1Q99LI9 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm16436-201ENSMUST00000121510 1607 ntBASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC7.04□□□□□ -1.28
Clp1Q99LI9 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gm8276-201ENSMUST00000192231 1812 ntBASIC7.04□□□□□ -1.28
Clp1Q99LI9 AC164107.1-202ENSMUST00000228953 1816 ntBASIC7.04□□□□□ -1.28
Clp1Q99LI9 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm3665-201ENSMUST00000177214 2461 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm9496-201ENSMUST00000191295 1601 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm13733-201ENSMUST00000117290 535 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm15382-201ENSMUST00000118011 537 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm15266-201ENSMUST00000119635 255 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Klra13-ps-201ENSMUST00000125813 802 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm25048-201ENSMUST00000158598 91 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Mir199b-201ENSMUST00000175066 110 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm25942-201ENSMUST00000180080 110 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm27428-201ENSMUST00000184289 110 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm20832-201ENSMUST00000189076 665 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm30638-201ENSMUST00000195570 656 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms