Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Gm44235-201ENSMUST00000204312 3058 ntBASIC4.76□□□□□ -1.65
Nkx3-1P97436 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Gm16007-201ENSMUST00000117837 286 ntBASIC4.76□□□□□ -1.65
Nkx3-1P97436 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nkx3-1P97436 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Gm11507-201ENSMUST00000156462 412 ntBASIC4.76□□□□□ -1.65
Nkx3-1P97436 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC4.76□□□□□ -1.65
Nkx3-1P97436 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Gm27541-201ENSMUST00000184078 122 ntBASIC4.76□□□□□ -1.65
Nkx3-1P97436 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.76□□□□□ -1.65
Nkx3-1P97436 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Gm44463-201ENSMUST00000198895 137 ntBASIC4.76□□□□□ -1.65
Nkx3-1P97436 Gm45700-201ENSMUST00000205866 347 ntBASIC4.76□□□□□ -1.65
Nkx3-1P97436 Gm18468-201ENSMUST00000207321 369 ntBASIC4.76□□□□□ -1.65
Nkx3-1P97436 Gm18470-201ENSMUST00000207467 420 ntBASIC4.76□□□□□ -1.65
Nkx3-1P97436 Gm18465-201ENSMUST00000207468 369 ntBASIC4.76□□□□□ -1.65
Nkx3-1P97436 Gm18464-201ENSMUST00000207803 420 ntBASIC4.76□□□□□ -1.65
Nkx3-1P97436 Gm18458-201ENSMUST00000207908 369 ntBASIC4.76□□□□□ -1.65
Nkx3-1P97436 Gm18461-201ENSMUST00000208421 420 ntBASIC4.76□□□□□ -1.65
Nkx3-1P97436 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.76□□□□□ -1.65
Nkx3-1P97436 AC164567.4-201ENSMUST00000219708 483 ntBASIC4.76□□□□□ -1.65
Nkx3-1P97436 Gm20368-201ENSMUST00000220716 301 ntBASIC4.76□□□□□ -1.65
Nkx3-1P97436 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Gm20287-201ENSMUST00000172848 2367 ntBASIC4.76□□□□□ -1.65
Nkx3-1P97436 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Nkx3-1P97436 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm37553-201ENSMUST00000194135 1602 ntBASIC4.75□□□□□ -1.65
Nkx3-1P97436 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm15740-201ENSMUST00000159703 1292 ntBASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC4.75□□□□□ -1.65
Nkx3-1P97436 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm22355-201ENSMUST00000175531 96 ntBASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm4832-201ENSMUST00000182679 399 ntBASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm27543-201ENSMUST00000183562 177 ntBASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm28683-201ENSMUST00000187134 615 ntBASIC4.75□□□□□ -1.65
Nkx3-1P97436 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm28840-205ENSMUST00000189320 615 ntBASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm28835-203ENSMUST00000190062 615 ntBASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm42640-201ENSMUST00000199792 1195 ntBASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm19065-202ENSMUST00000203910 1165 ntBASIC4.75□□□□□ -1.65
Nkx3-1P97436 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC4.75□□□□□ -1.65
Nkx3-1P97436 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm19189-201ENSMUST00000221689 754 ntBASIC4.75□□□□□ -1.65
Nkx3-1P97436 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC4.75□□□□□ -1.65
Nkx3-1P97436 AC129597.1-201ENSMUST00000223046 1234 ntBASIC4.75□□□□□ -1.65
Nkx3-1P97436 CT010486.1-201ENSMUST00000224609 422 ntBASIC4.75□□□□□ -1.65
Nkx3-1P97436 AC154436.2-201ENSMUST00000227408 208 ntBASIC4.75□□□□□ -1.65
Nkx3-1P97436 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm6104-201ENSMUST00000078030 603 ntBASIC4.75□□□□□ -1.65
Nkx3-1P97436 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm9386-201ENSMUST00000095195 381 ntBASIC4.75□□□□□ -1.65
Nkx3-1P97436 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC4.75□□□□□ -1.65
Nkx3-1P97436 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm42540-201ENSMUST00000200319 2008 ntBASIC4.75□□□□□ -1.65
Nkx3-1P97436 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx3-1P97436 Gm13590-201ENSMUST00000120183 1588 ntBASIC4.74□□□□□ -1.65
Nkx3-1P97436 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nkx3-1P97436 Gm42600-201ENSMUST00000202081 3588 ntBASIC4.74□□□□□ -1.65
Nkx3-1P97436 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms