Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Gm26959-201ENSMUST00000182376 978 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC7.53□□□□□ -1.2
Rfx1P48377 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Gm18875-201ENSMUST00000188563 882 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Gm28973-201ENSMUST00000189310 613 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 Gm8860-201ENSMUST00000193160 445 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Gm43096-201ENSMUST00000196173 421 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.53□□□□□ -1.2
Rfx1P48377 Gm42958-201ENSMUST00000197595 318 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rfx1P48377 Gm7463-201ENSMUST00000201541 547 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Gm18327-201ENSMUST00000202426 830 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Gm5027-201ENSMUST00000206700 375 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 AC155709.1-201ENSMUST00000218794 162 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 AC133598.2-201ENSMUST00000224302 624 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 AC160962.2-201ENSMUST00000224761 632 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
Rfx1P48377 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Rfx1P48377 Gm10540-201ENSMUST00000097581 276 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rfx1P48377 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rfx1P48377 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Rfx1P48377 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC7.53□□□□□ -1.2
Rfx1P48377 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rfx1P48377 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rfx1P48377 Gm18757-201ENSMUST00000207938 3141 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rfx1P48377 Gm37685-201ENSMUST00000193507 2177 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rfx1P48377 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 AC159188.2-201ENSMUST00000224103 1301 ntBASIC7.52□□□□□ -1.2
Rfx1P48377 Gm44742-201ENSMUST00000207190 1412 ntBASIC7.52□□□□□ -1.2
Rfx1P48377 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Rfx1P48377 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.2
Rfx1P48377 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Rfx1P48377 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Rfx1P48377 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Rfx1P48377 AC163731.1-201ENSMUST00000225696 3118 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Gm43503-201ENSMUST00000200033 3408 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rfx1P48377 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC7.52□□□□□ -1.21
Rfx1P48377 Gm37789-201ENSMUST00000192862 2889 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rfx1P48377 Gm28322-201ENSMUST00000185627 1475 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
Rfx1P48377 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Rfx1P48377 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Rfx1P48377 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rfx1P48377 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Rfx1P48377 Gm13141-201ENSMUST00000117417 456 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Gm8475-201ENSMUST00000118211 526 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Gm15094-201ENSMUST00000118394 1131 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Gm11719-201ENSMUST00000119399 351 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Gm12115-201ENSMUST00000119969 447 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Gm11553-201ENSMUST00000120682 240 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Gm11726-201ENSMUST00000121028 424 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Gm14728-201ENSMUST00000122196 492 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC7.52□□□□□ -1.21
Rfx1P48377 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC7.52□□□□□ -1.21
Rfx1P48377 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Rfx1P48377 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Rfx1P48377 Gm6395-201ENSMUST00000167639 691 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rfx1P48377 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC7.52□□□□□ -1.21
Rfx1P48377 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC7.52□□□□□ -1.21
Rfx1P48377 Gm22857-201ENSMUST00000174969 134 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Gm5283-201ENSMUST00000177874 334 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC7.52□□□□□ -1.21
Rfx1P48377 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
Rfx1P48377 Gm42502-201ENSMUST00000198550 1089 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Gm43708-201ENSMUST00000198857 961 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Gm44411-201ENSMUST00000204172 349 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Gm44979-201ENSMUST00000206218 287 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC7.52□□□□□ -1.21
Rfx1P48377 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC7.52□□□□□ -1.21
Rfx1P48377 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC7.52□□□□□ -1.21
Rfx1P48377 AC124184.1-201ENSMUST00000218167 283 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Gm32899-201ENSMUST00000219694 207 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC7.52□□□□□ -1.21
Rfx1P48377 AC158521.1-202ENSMUST00000224352 645 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 AC156790.3-201ENSMUST00000226200 254 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Rfx1P48377 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms