Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.12□□□□□ -1.43
Col2a1P28481 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col2a1P28481 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.12□□□□□ -1.43
Col2a1P28481 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col2a1P28481 Gm29293-201ENSMUST00000189416 2188 ntBASIC6.12□□□□□ -1.43
Col2a1P28481 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.12□□□□□ -1.43
Col2a1P28481 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Col2a1P28481 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC6.12□□□□□ -1.43
Col2a1P28481 Gm5285-201ENSMUST00000193089 666 ntBASIC6.12□□□□□ -1.43
Col2a1P28481 Gm45070-201ENSMUST00000208100 246 ntBASIC6.12□□□□□ -1.43
Col2a1P28481 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col2a1P28481 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Col2a1P28481 Gm24763-201ENSMUST00000083688 190 ntBASIC6.12□□□□□ -1.43
Col2a1P28481 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col2a1P28481 Gm44242-201ENSMUST00000204212 2721 ntBASIC6.12□□□□□ -1.43
Col2a1P28481 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col2a1P28481 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col2a1P28481 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col2a1P28481 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.12□□□□□ -1.43
Col2a1P28481 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Col2a1P28481 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col2a1P28481 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col2a1P28481 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC6.12□□□□□ -1.43
Col2a1P28481 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col2a1P28481 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col2a1P28481 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Col2a1P28481 Gm12633-201ENSMUST00000117742 1705 ntBASIC6.11□□□□□ -1.43
Col2a1P28481 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Col2a1P28481 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC6.11□□□□□ -1.43
Col2a1P28481 Gm22778-201ENSMUST00000104090 128 ntBASIC6.11□□□□□ -1.43
Col2a1P28481 Gm13679-201ENSMUST00000118678 484 ntBASIC6.11□□□□□ -1.43
Col2a1P28481 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC6.11□□□□□ -1.43
Col2a1P28481 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC6.11□□□□□ -1.43
Col2a1P28481 Gm17086-201ENSMUST00000171346 484 ntBASIC6.11□□□□□ -1.43
Col2a1P28481 Gm26731-201ENSMUST00000180683 543 ntBASIC6.11□□□□□ -1.43
Col2a1P28481 Gm27820-201ENSMUST00000183628 175 ntBASIC6.11□□□□□ -1.43
Col2a1P28481 Gm42640-201ENSMUST00000199792 1195 ntBASIC6.11□□□□□ -1.43
Col2a1P28481 Gm44134-202ENSMUST00000204777 545 ntBASIC6.11□□□□□ -1.43
Col2a1P28481 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC6.11□□□□□ -1.43
Col2a1P28481 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC6.11□□□□□ -1.43
Col2a1P28481 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col2a1P28481 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col2a1P28481 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col2a1P28481 Gm43567-201ENSMUST00000197581 1978 ntBASIC6.11□□□□□ -1.43
Col2a1P28481 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.11□□□□□ -1.43
Col2a1P28481 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col2a1P28481 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col2a1P28481 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col2a1P28481 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col2a1P28481 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.11□□□□□ -1.43
Col2a1P28481 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col2a1P28481 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col2a1P28481 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col2a1P28481 AC125095.1-201ENSMUST00000228387 2020 ntBASIC6.11□□□□□ -1.43
Col2a1P28481 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col2a1P28481 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col2a1P28481 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col2a1P28481 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col2a1P28481 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col2a1P28481 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col2a1P28481 Gm23274-201ENSMUST00000104056 130 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 Gm25418-201ENSMUST00000104214 129 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 Gm24855-201ENSMUST00000104848 97 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 Gm11699-201ENSMUST00000119016 401 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 Gm15791-201ENSMUST00000120365 319 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 Gm5383-201ENSMUST00000121177 617 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 Gm11759-201ENSMUST00000121742 464 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 Gm24363-201ENSMUST00000158440 311 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col2a1P28481 Gm26925-201ENSMUST00000182470 957 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 Gm9320-201ENSMUST00000184151 473 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 AC123064.1-201ENSMUST00000218950 406 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 AC134439.1-201ENSMUST00000220923 600 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col2a1P28481 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col2a1P28481 Mir342-201ENSMUST00000083502 99 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 n-R5s13-201ENSMUST00000093707 119 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col2a1P28481 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col2a1P28481 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col2a1P28481 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC6.1□□□□□ -1.43
Col2a1P28481 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
Col2a1P28481 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col2a1P28481 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Col2a1P28481 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col2a1P28481 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Col2a1P28481 AC107645.1-201ENSMUST00000228660 1810 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6.1□□□□□ -1.43
Col2a1P28481 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col2a1P28481 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col2a1P28481 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col2a1P28481 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Col2a1P28481 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col2a1P28481 Gm45819-201ENSMUST00000210940 1751 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 Gm18163-201ENSMUST00000197877 1643 ntBASIC6.1□□□□□ -1.43
Col2a1P28481 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms