Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC4.38□□□□□ -1.71
Sdc1P18828 Gm18330-201ENSMUST00000199246 547 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Gm43772-201ENSMUST00000202052 379 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC4.38□□□□□ -1.71
Sdc1P18828 Gm2961-201ENSMUST00000211074 772 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC4.38□□□□□ -1.71
Sdc1P18828 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 AC154361.1-201ENSMUST00000225694 745 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 AC102139.1-201ENSMUST00000227000 251 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Sdc1P18828 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Sdc1P18828 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Sdc1P18828 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sdc1P18828 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Sdc1P18828 Gm43784-201ENSMUST00000202922 2436 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Sdc1P18828 Gm43027-201ENSMUST00000202906 3691 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sdc1P18828 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Sdc1P18828 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Sdc1P18828 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sdc1P18828 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Sdc1P18828 Smc5-206ENSMUST00000226111 3265 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 AC151734.1-201ENSMUST00000227023 1740 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sdc1P18828 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Sdc1P18828 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Sdc1P18828 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Sdc1P18828 Gm43169-201ENSMUST00000199544 4734 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Sdc1P18828 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.37□□□□□ -1.71
Sdc1P18828 CT025556.1-201ENSMUST00000222965 1884 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Sdc1P18828 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Gm25785-201ENSMUST00000104129 125 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Gm14711-201ENSMUST00000117056 217 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC4.37□□□□□ -1.71
Sdc1P18828 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC4.37□□□□□ -1.71
Sdc1P18828 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC4.37□□□□□ -1.71
Sdc1P18828 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC4.37□□□□□ -1.71
Sdc1P18828 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Sdc1P18828 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC4.37□□□□□ -1.71
Sdc1P18828 Gm23897-201ENSMUST00000158110 158 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Gm17152-201ENSMUST00000172430 535 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Sdc1P18828 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Gm27804-201ENSMUST00000185135 119 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC4.37□□□□□ -1.71
Sdc1P18828 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC4.37□□□□□ -1.71
Sdc1P18828 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Sdc1P18828 Gm21577-201ENSMUST00000190823 697 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC4.37□□□□□ -1.71
Sdc1P18828 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC4.37□□□□□ -1.71
Sdc1P18828 Gm38328-201ENSMUST00000195582 317 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Gm2287-201ENSMUST00000197417 1084 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC4.37□□□□□ -1.71
Sdc1P18828 Gm43036-201ENSMUST00000200594 373 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Sdc1P18828 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Sdc1P18828 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC4.37□□□□□ -1.71
Sdc1P18828 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Sdc1P18828 Gm44690-201ENSMUST00000207984 382 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Gm19092-201ENSMUST00000209036 969 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Gm18996-201ENSMUST00000214851 755 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC4.37□□□□□ -1.71
Sdc1P18828 AC133598.2-201ENSMUST00000224302 624 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 CT030194.2-201ENSMUST00000225752 379 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Sdc1P18828 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Sdc1P18828 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Sdc1P18828 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Sdc1P18828 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Sdc1P18828 AC159326.1-201ENSMUST00000219989 1302 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Gm37010-201ENSMUST00000194539 1704 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Sdc1P18828 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Sdc1P18828 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Sdc1P18828 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Sdc1P18828 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Sdc1P18828 Gm5715-201ENSMUST00000196854 1465 ntBASIC4.37□□□□□ -1.71
Sdc1P18828 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Sdc1P18828 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Sdc1P18828 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.36□□□□□ -1.71
Sdc1P18828 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.36□□□□□ -1.71
Sdc1P18828 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Sdc1P18828 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Sdc1P18828 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms