Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5538W4VSP6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5538W4VSP6 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.18■□□□□ 0.5
Gm5538W4VSP6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5538W4VSP6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5538W4VSP6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5538W4VSP6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5538W4VSP6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5538W4VSP6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Gm5538W4VSP6 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.18■□□□□ 0.5
Gm5538W4VSP6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Gm5538W4VSP6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5538W4VSP6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5538W4VSP6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5538W4VSP6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5538W4VSP6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5538W4VSP6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5538W4VSP6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Gm5538W4VSP6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.17■□□□□ 0.5
Gm5538W4VSP6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5538W4VSP6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5538W4VSP6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5538W4VSP6 Trmt13-210ENSMUST00000198454 880 ntBASIC18.17■□□□□ 0.5
Gm5538W4VSP6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5538W4VSP6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5538W4VSP6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.17■□□□□ 0.5
Gm5538W4VSP6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5538W4VSP6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5538W4VSP6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5538W4VSP6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5538W4VSP6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5538W4VSP6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5538W4VSP6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5538W4VSP6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5538W4VSP6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Gm5538W4VSP6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.16■□□□□ 0.5
Gm5538W4VSP6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5538W4VSP6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5538W4VSP6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5538W4VSP6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5538W4VSP6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5538W4VSP6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5538W4VSP6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5538W4VSP6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5538W4VSP6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5538W4VSP6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5538W4VSP6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.15■□□□□ 0.5
Gm5538W4VSP6 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.15■□□□□ 0.5
Gm5538W4VSP6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5538W4VSP6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.15■□□□□ 0.5
Gm5538W4VSP6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5538W4VSP6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Gm5538W4VSP6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5538W4VSP6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5538W4VSP6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Gm5538W4VSP6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Gm5538W4VSP6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Gm5538W4VSP6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Gm5538W4VSP6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Gm5538W4VSP6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5538W4VSP6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5538W4VSP6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Gm5538W4VSP6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5538W4VSP6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
Gm5538W4VSP6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5538W4VSP6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5538W4VSP6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5538W4VSP6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
Gm5538W4VSP6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5538W4VSP6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5538W4VSP6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5538W4VSP6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
Gm5538W4VSP6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5538W4VSP6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.13■□□□□ 0.49
Gm5538W4VSP6 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.13■□□□□ 0.49
Gm5538W4VSP6 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.13■□□□□ 0.49
Gm5538W4VSP6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Gm5538W4VSP6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5538W4VSP6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5538W4VSP6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5538W4VSP6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
Gm5538W4VSP6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5538W4VSP6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Gm5538W4VSP6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.13■□□□□ 0.49
Gm5538W4VSP6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5538W4VSP6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.13■□□□□ 0.49
Gm5538W4VSP6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.13■□□□□ 0.49
Gm5538W4VSP6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5538W4VSP6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5538W4VSP6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5538W4VSP6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5538W4VSP6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5538W4VSP6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5538W4VSP6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.12■□□□□ 0.49
Gm5538W4VSP6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5538W4VSP6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5538W4VSP6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5538W4VSP6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.12■□□□□ 0.49
Gm5538W4VSP6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5538W4VSP6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms