Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Nr1h3Q9Z0Y9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1h3Q9Z0Y9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1h3Q9Z0Y9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Nr1h3Q9Z0Y9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1h3Q9Z0Y9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1h3Q9Z0Y9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1h3Q9Z0Y9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Nr1h3Q9Z0Y9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Nr1h3Q9Z0Y9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nr1h3Q9Z0Y9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1h3Q9Z0Y9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1h3Q9Z0Y9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1h3Q9Z0Y9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1h3Q9Z0Y9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1h3Q9Z0Y9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.34■□□□□ 0.69
Nr1h3Q9Z0Y9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1h3Q9Z0Y9 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.34■□□□□ 0.69
Nr1h3Q9Z0Y9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1h3Q9Z0Y9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nr1h3Q9Z0Y9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nr1h3Q9Z0Y9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nr1h3Q9Z0Y9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.33■□□□□ 0.68
Nr1h3Q9Z0Y9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.33■□□□□ 0.68
Nr1h3Q9Z0Y9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nr1h3Q9Z0Y9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr1h3Q9Z0Y9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr1h3Q9Z0Y9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr1h3Q9Z0Y9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Nr1h3Q9Z0Y9 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.33■□□□□ 0.68
Nr1h3Q9Z0Y9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Nr1h3Q9Z0Y9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1h3Q9Z0Y9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1h3Q9Z0Y9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1h3Q9Z0Y9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.32■□□□□ 0.68
Nr1h3Q9Z0Y9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1h3Q9Z0Y9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Nr1h3Q9Z0Y9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1h3Q9Z0Y9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1h3Q9Z0Y9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1h3Q9Z0Y9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1h3Q9Z0Y9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1h3Q9Z0Y9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1h3Q9Z0Y9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1h3Q9Z0Y9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nr1h3Q9Z0Y9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1h3Q9Z0Y9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Nr1h3Q9Z0Y9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1h3Q9Z0Y9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1h3Q9Z0Y9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1h3Q9Z0Y9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nr1h3Q9Z0Y9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1h3Q9Z0Y9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1h3Q9Z0Y9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nr1h3Q9Z0Y9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Gm13559-201ENSMUST00000120476 863 ntBASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Gm3375-201ENSMUST00000203929 796 ntBASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h3Q9Z0Y9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.29■□□□□ 0.68
Nr1h3Q9Z0Y9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h3Q9Z0Y9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h3Q9Z0Y9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nr1h3Q9Z0Y9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h3Q9Z0Y9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h3Q9Z0Y9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h3Q9Z0Y9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h3Q9Z0Y9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.29■□□□□ 0.68
Nr1h3Q9Z0Y9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h3Q9Z0Y9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Nr1h3Q9Z0Y9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h3Q9Z0Y9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h3Q9Z0Y9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.29■□□□□ 0.68
Nr1h3Q9Z0Y9 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.29■□□□□ 0.68
Nr1h3Q9Z0Y9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h3Q9Z0Y9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h3Q9Z0Y9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1h3Q9Z0Y9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Nr1h3Q9Z0Y9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.28■□□□□ 0.68
Nr1h3Q9Z0Y9 Gm11539-201ENSMUST00000119837 557 ntBASIC19.28■□□□□ 0.68
Nr1h3Q9Z0Y9 Gm13436-201ENSMUST00000120418 567 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms