Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Zfp783-201ENSMUST00000095946 670 ntBASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.15■□□□□ 0.34
Cldn9Q9Z0S7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn9Q9Z0S7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn9Q9Z0S7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn9Q9Z0S7 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.13■□□□□ 0.33
Cldn9Q9Z0S7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.13■□□□□ 0.33
Cldn9Q9Z0S7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn9Q9Z0S7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn9Q9Z0S7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn9Q9Z0S7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cldn9Q9Z0S7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn9Q9Z0S7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn9Q9Z0S7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn9Q9Z0S7 Gm5408-201ENSMUST00000197998 747 ntBASIC17.13■□□□□ 0.33
Cldn9Q9Z0S7 Gm8969-201ENSMUST00000199694 526 ntBASIC17.13■□□□□ 0.33
Cldn9Q9Z0S7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn9Q9Z0S7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn9Q9Z0S7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn9Q9Z0S7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn9Q9Z0S7 Idnk-204ENSMUST00000226010 1898 ntBASIC17.12■□□□□ 0.33
Cldn9Q9Z0S7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn9Q9Z0S7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn9Q9Z0S7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn9Q9Z0S7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Cldn9Q9Z0S7 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.12■□□□□ 0.33
Cldn9Q9Z0S7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.12■□□□□ 0.33
Cldn9Q9Z0S7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.12■□□□□ 0.33
Cldn9Q9Z0S7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn9Q9Z0S7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Cldn9Q9Z0S7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn9Q9Z0S7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn9Q9Z0S7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cldn9Q9Z0S7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn9Q9Z0S7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Cldn9Q9Z0S7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cldn9Q9Z0S7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn9Q9Z0S7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn9Q9Z0S7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms