Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18■□□□□ 0.47
Scn8aQ9WTU3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Scn8aQ9WTU3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn8aQ9WTU3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Scn8aQ9WTU3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scn8aQ9WTU3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scn8aQ9WTU3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn8aQ9WTU3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scn8aQ9WTU3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18■□□□□ 0.47
Scn8aQ9WTU3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Scn8aQ9WTU3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Scn8aQ9WTU3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Scn8aQ9WTU3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18■□□□□ 0.47
Scn8aQ9WTU3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Scn8aQ9WTU3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18■□□□□ 0.47
Scn8aQ9WTU3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn8aQ9WTU3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn8aQ9WTU3 Gm5953-201ENSMUST00000220644 2616 ntBASIC18■□□□□ 0.47
Scn8aQ9WTU3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 Gm38027-201ENSMUST00000192315 235 ntBASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Scn8aQ9WTU3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Scn8aQ9WTU3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Scn8aQ9WTU3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Scn8aQ9WTU3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn8aQ9WTU3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Scn8aQ9WTU3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Scn8aQ9WTU3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Scn8aQ9WTU3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn8aQ9WTU3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn8aQ9WTU3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn8aQ9WTU3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn8aQ9WTU3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Scn8aQ9WTU3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn8aQ9WTU3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn8aQ9WTU3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn8aQ9WTU3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.97■□□□□ 0.47
Scn8aQ9WTU3 Gm10517-202ENSMUST00000192970 758 ntBASIC17.97■□□□□ 0.47
Scn8aQ9WTU3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn8aQ9WTU3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scn8aQ9WTU3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn8aQ9WTU3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn8aQ9WTU3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn8aQ9WTU3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn8aQ9WTU3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn8aQ9WTU3 Gm7889-201ENSMUST00000185591 958 ntBASIC17.97■□□□□ 0.47
Scn8aQ9WTU3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn8aQ9WTU3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn8aQ9WTU3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scn8aQ9WTU3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn8aQ9WTU3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Scn8aQ9WTU3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn8aQ9WTU3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn8aQ9WTU3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn8aQ9WTU3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn8aQ9WTU3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn8aQ9WTU3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.96■□□□□ 0.47
Scn8aQ9WTU3 Gm11539-201ENSMUST00000119837 557 ntBASIC17.96■□□□□ 0.47
Scn8aQ9WTU3 Gm13436-201ENSMUST00000120418 567 ntBASIC17.96■□□□□ 0.47
Scn8aQ9WTU3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.96■□□□□ 0.47
Scn8aQ9WTU3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Scn8aQ9WTU3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn8aQ9WTU3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn8aQ9WTU3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn8aQ9WTU3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms