Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chaf1aQ9QWF0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Chaf1aQ9QWF0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chaf1aQ9QWF0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chaf1aQ9QWF0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chaf1aQ9QWF0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chaf1aQ9QWF0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.93■□□□□ 0.78
Chaf1aQ9QWF0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chaf1aQ9QWF0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chaf1aQ9QWF0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chaf1aQ9QWF0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.93■□□□□ 0.78
Chaf1aQ9QWF0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chaf1aQ9QWF0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chaf1aQ9QWF0 Gm7514-201ENSMUST00000209475 934 ntBASIC19.92■□□□□ 0.78
Chaf1aQ9QWF0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.92■□□□□ 0.78
Chaf1aQ9QWF0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chaf1aQ9QWF0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Chaf1aQ9QWF0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chaf1aQ9QWF0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1aQ9QWF0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1aQ9QWF0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Chaf1aQ9QWF0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1aQ9QWF0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1aQ9QWF0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1aQ9QWF0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1aQ9QWF0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1aQ9QWF0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1aQ9QWF0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1aQ9QWF0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1aQ9QWF0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1aQ9QWF0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.91■□□□□ 0.78
Chaf1aQ9QWF0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1aQ9QWF0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1aQ9QWF0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1aQ9QWF0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chaf1aQ9QWF0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chaf1aQ9QWF0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chaf1aQ9QWF0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.9■□□□□ 0.78
Chaf1aQ9QWF0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chaf1aQ9QWF0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chaf1aQ9QWF0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chaf1aQ9QWF0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chaf1aQ9QWF0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chaf1aQ9QWF0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Chaf1aQ9QWF0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chaf1aQ9QWF0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
Chaf1aQ9QWF0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chaf1aQ9QWF0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chaf1aQ9QWF0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chaf1aQ9QWF0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chaf1aQ9QWF0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Chaf1aQ9QWF0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chaf1aQ9QWF0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chaf1aQ9QWF0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chaf1aQ9QWF0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chaf1aQ9QWF0 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.89■□□□□ 0.77
Chaf1aQ9QWF0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chaf1aQ9QWF0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.88■□□□□ 0.77
Chaf1aQ9QWF0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chaf1aQ9QWF0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.88■□□□□ 0.77
Chaf1aQ9QWF0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.88■□□□□ 0.77
Chaf1aQ9QWF0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Chaf1aQ9QWF0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.88■□□□□ 0.77
Chaf1aQ9QWF0 Gm18671-201ENSMUST00000214826 683 ntBASIC19.88■□□□□ 0.77
Chaf1aQ9QWF0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chaf1aQ9QWF0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Chaf1aQ9QWF0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chaf1aQ9QWF0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chaf1aQ9QWF0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chaf1aQ9QWF0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Chaf1aQ9QWF0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chaf1aQ9QWF0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chaf1aQ9QWF0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chaf1aQ9QWF0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chaf1aQ9QWF0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chaf1aQ9QWF0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chaf1aQ9QWF0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chaf1aQ9QWF0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.87■□□□□ 0.77
Chaf1aQ9QWF0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Chaf1aQ9QWF0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Chaf1aQ9QWF0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chaf1aQ9QWF0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chaf1aQ9QWF0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chaf1aQ9QWF0 Gm42642-201ENSMUST00000200683 355 ntBASIC19.87■□□□□ 0.77
Chaf1aQ9QWF0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Chaf1aQ9QWF0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chaf1aQ9QWF0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chaf1aQ9QWF0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chaf1aQ9QWF0 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.87■□□□□ 0.77
Chaf1aQ9QWF0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chaf1aQ9QWF0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chaf1aQ9QWF0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Chaf1aQ9QWF0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chaf1aQ9QWF0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chaf1aQ9QWF0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chaf1aQ9QWF0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chaf1aQ9QWF0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.86■□□□□ 0.77
Chaf1aQ9QWF0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.86■□□□□ 0.77
Chaf1aQ9QWF0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chaf1aQ9QWF0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms