Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Gm7290-201ENSMUST00000104990 617 ntBASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Gm12918-201ENSMUST00000120234 636 ntBASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Gm15710-201ENSMUST00000121821 636 ntBASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Gm5075-201ENSMUST00000196916 622 ntBASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a2Q9JLR1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Sec61a2Q9JLR1 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.02■□□□□ 0.16
Sec61a2Q9JLR1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sec61a2Q9JLR1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sec61a2Q9JLR1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sec61a2Q9JLR1 Gm22325-201ENSMUST00000158904 308 ntBASIC16.02■□□□□ 0.16
Sec61a2Q9JLR1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Sec61a2Q9JLR1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sec61a2Q9JLR1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sec61a2Q9JLR1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sec61a2Q9JLR1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sec61a2Q9JLR1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sec61a2Q9JLR1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Sec61a2Q9JLR1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Sec61a2Q9JLR1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Sec61a2Q9JLR1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Sec61a2Q9JLR1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.01■□□□□ 0.15
Sec61a2Q9JLR1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.01■□□□□ 0.15
Sec61a2Q9JLR1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a2Q9JLR1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a2Q9JLR1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Sec61a2Q9JLR1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a2Q9JLR1 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.01■□□□□ 0.15
Sec61a2Q9JLR1 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.01■□□□□ 0.15
Sec61a2Q9JLR1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a2Q9JLR1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a2Q9JLR1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.01■□□□□ 0.15
Sec61a2Q9JLR1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.01■□□□□ 0.15
Sec61a2Q9JLR1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a2Q9JLR1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.01■□□□□ 0.15
Sec61a2Q9JLR1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a2Q9JLR1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a2Q9JLR1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Sec61a2Q9JLR1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a2Q9JLR1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Gm5408-201ENSMUST00000197998 747 ntBASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Gm5297-201ENSMUST00000198555 1171 ntBASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms