Protein–RNA interactions for Protein: Q9JI58

Raet1d, Retinoic acid early-inducible protein 1-delta, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1dQ9JI58 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.52■□□□□ 0.24
Raet1dQ9JI58 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Raet1dQ9JI58 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Raet1dQ9JI58 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Raet1dQ9JI58 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.52■□□□□ 0.24
Raet1dQ9JI58 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.52■□□□□ 0.24
Raet1dQ9JI58 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Raet1dQ9JI58 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.52■□□□□ 0.24
Raet1dQ9JI58 Gm20049-201ENSMUST00000219950 730 ntBASIC16.52■□□□□ 0.24
Raet1dQ9JI58 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Raet1dQ9JI58 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Raet1dQ9JI58 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Raet1dQ9JI58 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Raet1dQ9JI58 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Raet1dQ9JI58 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Raet1dQ9JI58 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Raet1dQ9JI58 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Raet1dQ9JI58 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Raet1dQ9JI58 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Raet1dQ9JI58 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Raet1dQ9JI58 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Raet1dQ9JI58 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Raet1dQ9JI58 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Raet1dQ9JI58 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Raet1dQ9JI58 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Raet1dQ9JI58 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Raet1dQ9JI58 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.51■□□□□ 0.23
Raet1dQ9JI58 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.51■□□□□ 0.23
Raet1dQ9JI58 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Raet1dQ9JI58 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Raet1dQ9JI58 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Raet1dQ9JI58 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Raet1dQ9JI58 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.51■□□□□ 0.23
Raet1dQ9JI58 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Raet1dQ9JI58 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Mtag2-201ENSMUST00000058665 714 ntBASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Raet1dQ9JI58 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.49■□□□□ 0.23
Raet1dQ9JI58 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Raet1dQ9JI58 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1dQ9JI58 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1dQ9JI58 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1dQ9JI58 Gm11249-201ENSMUST00000117071 859 ntBASIC16.49■□□□□ 0.23
Raet1dQ9JI58 Gm27275-201ENSMUST00000184318 272 ntBASIC16.49■□□□□ 0.23
Raet1dQ9JI58 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1dQ9JI58 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1dQ9JI58 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1dQ9JI58 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.49■□□□□ 0.23
Raet1dQ9JI58 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1dQ9JI58 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1dQ9JI58 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1dQ9JI58 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1dQ9JI58 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1dQ9JI58 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1dQ9JI58 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.47■□□□□ 0.23
Raet1dQ9JI58 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Raet1dQ9JI58 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.47■□□□□ 0.23
Raet1dQ9JI58 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Raet1dQ9JI58 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Raet1dQ9JI58 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Raet1dQ9JI58 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Raet1dQ9JI58 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms