Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tubb3Q9ERD7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tubb3Q9ERD7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Tubb3Q9ERD7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tubb3Q9ERD7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tubb3Q9ERD7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tubb3Q9ERD7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tubb3Q9ERD7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tubb3Q9ERD7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Tubb3Q9ERD7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tubb3Q9ERD7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tubb3Q9ERD7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tubb3Q9ERD7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubb3Q9ERD7 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.69■□□□□ 0.42
Tubb3Q9ERD7 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.69■□□□□ 0.42
Tubb3Q9ERD7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubb3Q9ERD7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tubb3Q9ERD7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubb3Q9ERD7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubb3Q9ERD7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubb3Q9ERD7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.69■□□□□ 0.42
Tubb3Q9ERD7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Tubb3Q9ERD7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubb3Q9ERD7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tubb3Q9ERD7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubb3Q9ERD7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Tubb3Q9ERD7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubb3Q9ERD7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubb3Q9ERD7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubb3Q9ERD7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubb3Q9ERD7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb3Q9ERD7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb3Q9ERD7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb3Q9ERD7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb3Q9ERD7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb3Q9ERD7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb3Q9ERD7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.68■□□□□ 0.42
Tubb3Q9ERD7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.68■□□□□ 0.42
Tubb3Q9ERD7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.68■□□□□ 0.42
Tubb3Q9ERD7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb3Q9ERD7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.68■□□□□ 0.42
Tubb3Q9ERD7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb3Q9ERD7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tubb3Q9ERD7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb3Q9ERD7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tubb3Q9ERD7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Tubb3Q9ERD7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb3Q9ERD7 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.67■□□□□ 0.42
Tubb3Q9ERD7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.67■□□□□ 0.42
Tubb3Q9ERD7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubb3Q9ERD7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Tubb3Q9ERD7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tubb3Q9ERD7 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.67■□□□□ 0.42
Tubb3Q9ERD7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tubb3Q9ERD7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tubb3Q9ERD7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Tubb3Q9ERD7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Tubb3Q9ERD7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubb3Q9ERD7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tubb3Q9ERD7 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.67■□□□□ 0.42
Tubb3Q9ERD7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tubb3Q9ERD7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.67■□□□□ 0.42
Tubb3Q9ERD7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 Gm8520-201ENSMUST00000186517 868 ntBASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb3Q9ERD7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb3Q9ERD7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb3Q9ERD7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb3Q9ERD7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb3Q9ERD7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb3Q9ERD7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb3Q9ERD7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb3Q9ERD7 Gm22240-201ENSMUST00000175225 82 ntBASIC17.65■□□□□ 0.42
Tubb3Q9ERD7 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.65■□□□□ 0.42
Tubb3Q9ERD7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb3Q9ERD7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Tubb3Q9ERD7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb3Q9ERD7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tubb3Q9ERD7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.65■□□□□ 0.42
Tubb3Q9ERD7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tubb3Q9ERD7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Tubb3Q9ERD7 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.65■□□□□ 0.42
Tubb3Q9ERD7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb3Q9ERD7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms